Pairwise Alignments

Query, 284 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 12/235 (5%)

Query: 23  IAVSAHAATTLDSL---KEQGSVRIGYANE-TPFAYTGTDGKVTGESPEIATAIFKQLGI 78
           +  +A  ATT+  +   KE  +VR G      PF++T  DG + G   ++A A+  ++ +
Sbjct: 7   LVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAEMQV 66

Query: 79  KDVNGVLTEWGSLIPGLRAGRFDAIAAGMYITPARCKQVLFTDPHYQLPDALLVPKGNPK 138
            +   V  +W  +IP L A ++DAI A M IT  R K+V FT  + Q+P+  +  KG   
Sbjct: 67  -ECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKG--A 123

Query: 139 ELFSYEDVAKNPEVKLAIMAGTVELQYARDSGVKDEQILQVPDTTAQLQAVRAKRADAAV 198
           +L   ++  K   VK+ +   T   +Y  D+      I++          +   R  A +
Sbjct: 124 DLAFTKEGLKG--VKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVL 181

Query: 199 GTQLTM-KGLAAK-GGDSVEAMTDFKDDPSHIGYG-ALAFRPEDKELRDQVNAQL 250
           G    + +G+  K GGD+ E +     DP   G G  +A R +DKEL ++++A +
Sbjct: 182 GDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAI 236