Pairwise Alignments

Query, 339 a.a., branched-chain alpha-keto acid dehydrogenase complex, beta subunit from Pseudomonas putida KT2440

Subject, 641 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Rhodopseudomonas palustris CGA009

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 43/297 (14%)

Query: 54  RVFDAPISESGIVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSELARLRYRSAGEFIA 113
           R FD  I+E   V  A G+   G +P   I ++ +   A DQIV ++A          I 
Sbjct: 364 RTFDVGIAEQHAVTFAAGLATEGYKPFCAI-YSTFLQRAYDQIVHDVA----------IQ 412

Query: 114 PLTLRMPCG-GGIYG--GQTHSQSPEAMFTQVCGLRTVMPS-NPYDAKGLLIASIECDDP 169
            L +R      G+ G  G TH+ S +  +        +M + +  +   ++   +  DD 
Sbjct: 413 KLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDR 472

Query: 170 VIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVTVLTYG 229
                       P    + R      + P   +P     + + K  + R GN V +L++G
Sbjct: 473 ------------PSAVRYPRGEGRGVEMPEVGIP-----LEIGKGRVIRQGNKVALLSFG 515

Query: 230 TTVYVAQVAAEE---SGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGA 286
           T +  A+ AA+E    G+   V D R + PLD++ +++  +     + + E +   GFG+
Sbjct: 516 TRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGS-IGGFGS 574

Query: 287 ELVSLVQEHCFHHLEAPIERVTGWDTPYPHAQEWAYFPGPSRVG----AALKKVMEV 339
            ++  + EH     E  +  +   D    H    A +   +R G    A +KKV +V
Sbjct: 575 HVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMY---ARAGLDAKAIVKKVFDV 628