Pairwise Alignments

Query, 339 a.a., branched-chain alpha-keto acid dehydrogenase complex, beta subunit from Pseudomonas putida KT2440

Subject, 325 a.a., alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  308 bits (790), Expect = 9e-89
 Identities = 157/333 (47%), Positives = 213/333 (63%), Gaps = 20/333 (6%)

Query: 6   MTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQNKYGKSRVFDAPISESGI 65
           M M+QA+  A+ + ++ D+ +VV+G+DVG+FGGVFR T GLQ K+G++R F+ P++E GI
Sbjct: 4   MNMLQAVNEALSIAMQADERMVVFGEDVGHFGGVFRATSGLQEKFGRARCFNTPLTEQGI 63

Query: 66  VGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSELARLRYRSAGEF-IAPLTLRMPCGGG 124
            G A G+ + G+  V EIQFADY +PA DQIV+E A+ RYRS  EF +  L  R P GGG
Sbjct: 64  AGFANGLASNGMTAVAEIQFADYIFPAFDQIVNESAKFRYRSGNEFNVGSLVFRTPYGGG 123

Query: 125 IYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDPVIFLEPKRLYNGPFD 184
           I GG  HSQSPEA FTQ  GL+ V+P NP  AKGLL+ASI   +PV+F EPKRLY     
Sbjct: 124 IAGGHYHSQSPEAYFTQTPGLKVVVPRNPAQAKGLLLASIRDKNPVVFFEPKRLYRASV- 182

Query: 185 GHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVTVLTYGTTVYVAQVAAE---E 241
                            VP G Y + L KA + R G D+T++ +G  + + + AA+   +
Sbjct: 183 ---------------GDVPAGDYEIELGKAEVLREGKDITLVAWGAQMEIIEKAADMAAK 227

Query: 242 SGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAELVSLVQEHCFHHLE 301
            G+  E+IDLR+L P D++T+ +SVKKTGR +V HEA  T GF  E+ + +Q+ CF +LE
Sbjct: 228 EGISCEIIDLRTLAPWDVNTVADSVKKTGRLLVNHEAPLTGGFAGEIAATIQQECFLYLE 287

Query: 302 APIERVTGWDTPYPHAQEWAYFPGPSRVGAALK 334
           +PI RV G DTPYP   E  Y P   +   A+K
Sbjct: 288 SPISRVCGLDTPYPLVHEKEYMPDALKTFEAIK 320