Pairwise Alignments

Query, 339 a.a., branched-chain alpha-keto acid dehydrogenase complex, beta subunit from Pseudomonas putida KT2440

Subject, 622 a.a., 1-deoxy-D-xylulose-5-phosphate synthase (RefSeq) from Shewanella sp. ANA-3

 Score = 64.7 bits (156), Expect = 6e-15
 Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 32/242 (13%)

Query: 56  FDAPISESGIVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSELARLRYRSAGEFIAPL 115
           FDA I+E   V    G    G +PVV I ++ +     DQ++ ++A  R         P+
Sbjct: 364 FDAAIAEQHAVTLGAGFACEGFKPVVAI-YSTFLQRGYDQLIHDVALQRL--------PV 414

Query: 116 TLRMPCGGGIYG--GQTHSQSPEAMFTQVCGLRTVM-PSNPYDAKGLLIASIECDDPVIF 172
              +   GGI G  G TH  + +  F +      +M PS+  + + +L     C D    
Sbjct: 415 LFAID-RGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGY-CYDA--- 469

Query: 173 LEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVTVLTYGTTV 232
                   GP    + R     +    +        +P+ K  I R G  + +L +GTT+
Sbjct: 470 --------GPSAVRYPRGSATGATQVEAMT-----ALPIGKGVIKRLGKGIAMLNFGTTL 516

Query: 233 YVAQVAAEESGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAELVSLV 292
             A  AAE   +DA V+D+R + PLD+D + E  +     V V E     G G+ ++ L+
Sbjct: 517 AAALTAAES--LDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGVLELL 574

Query: 293 QE 294
           Q+
Sbjct: 575 QK 576