Pairwise Alignments

Query, 246 a.a., flagellar basal-body rod protein FlgF from Pseudomonas putida KT2440

Subject, 242 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

 Score =  200 bits (508), Expect = 2e-56
 Identities = 107/244 (43%), Positives = 160/244 (65%), Gaps = 4/244 (1%)

Query: 1   MDKLLYVAMTGASQNALAQKAHANNLANISTNGFQRDLEQARSMPVFGDSFPARAFAMTE 60
           MD+L Y AMT AS+  ++ +  +NNLAN++T GF+ DLE+A+++ V G  + +R  A+ E
Sbjct: 1   MDRLGYTAMTAASRTMMSLQVRSNNLANVNTPGFRADLERAQAVAVEGYGYDSRHMALIE 60

Query: 61  RPATDFSEGPLVETGRDLDVAVTGKGFIAVQAPDGSEAYVRTGSLNIDALGVLRAGNGMP 120
                 + GP+V TGR+LD AV G G I +Q  +G EAY R GS+ +DA G L   NG  
Sbjct: 61  NNGVSLAAGPMVATGRELDFAVKGTGLIVLQDGEG-EAYTRQGSMQVDAEGRLTL-NGRA 118

Query: 121 VIGNGGPIAIPPEQKVEVGADGTISIRSMGEDPRVMAEVDRIKLVNPDTKGLTKGLDGLI 180
           V+G GGPI +P   ++E+G DGT+S+ + G+   +MAEVDRI+LV+     L K   GL+
Sbjct: 119 VLGEGGPIVLPEYDRMEIGNDGTVSVMAPGD--WMMAEVDRIRLVDVPAANLMKNQAGLL 176

Query: 181 HTTSGQPADADVNVRVVAGFLEGSNVNAVEEMTSVLALSRQFELHVKMMNTAKEGDEAMA 240
            T  G+PA    +VR+ +GFLE SNV+A++E+ S ++L+R FE  VKMM  A++  +A  
Sbjct: 177 VTRDGEPAQPSEDVRLASGFLESSNVSAIDELASTMSLNRLFETQVKMMKAAEDLSDAGN 236

Query: 241 RVLQ 244
           R+++
Sbjct: 237 RMIR 240