Pairwise Alignments

Query, 261 a.a., flagellar basal-body rod protein FlgG from Pseudomonas putida KT2440

Subject, 528 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 62/174 (35%), Positives = 86/174 (49%), Gaps = 15/174 (8%)

Query: 7   VAKTGLSAQDTNLTVISNNLANVSTTGFKRDRAEFADLLYQIKRQPGAQSTQDSELPSGL 66
           +  +GL A   +L V  NN+AN  T GFK+ RAEF+D +Y        ++ Q        
Sbjct: 5   IGLSGLRAASKDLNVTGNNIANAGTVGFKQSRAEFSD-VYAASVLGTGKNPQ-------- 55

Query: 67  QVGTGVRIVGTQKSFVAGSLQTTDNPLDMAVNGRGFFQILQPDGTVSYTRDGTFHLNSDG 126
             G+GV +    + F  G++  T N LD+A+NG GFFQI   +G VSYTR G F  +  G
Sbjct: 56  --GSGVLMSNISQQFNQGNINYTQNALDLAINGNGFFQI-SNNGAVSYTRAGYFGTDRSG 112

Query: 127 QIVTDNGYALEPAIVVPNDAQTFTVGQDGTVSITTAGNPAAQVIGNIQTADFIN 180
            +V + GY L+   V  N       G  G + I T  N A +    I TA  +N
Sbjct: 113 FLVDNFGYKLQGFPVDGNG--NLQNGVIGDLQIQTT-NQAPKATSQINTAFNLN 163



 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 109 DGTVSYTRDGTFHLNSDGQIVTDNGYALE--PAIVVPNDAQT-FTVGQDGTVSITTAG-- 163
           +G    T      L + G IV D   + +   A  V + AQ  +T G+   + I   G  
Sbjct: 366 NGATPATWSANGALANPGGIVLDFSKSTQYASAFAVNSVAQDGYTTGELAGLEIDDTGVI 425

Query: 164 -----NPAAQVIGNIQTADFINPAGLQAIGDNLFLETAASGAPQVGTPGLNGFGTTLQQT 218
                N  ++V G I  A+F N  GL  +G   ++++  SG P VGTPG    G      
Sbjct: 426 FARYTNGQSKVQGQIILANFANVQGLTPVGKTQWVQSFESGEPVVGTPGSGTLGALQAGA 485

Query: 219 LENSNVSTVEELVNMITTQRAYEMNSKVIST 249
           LE+SNV   ++LVN+I  QR Y+ N+K I T
Sbjct: 486 LEDSNVELSDQLVNLIVAQRNYQANAKTIET 516