Pairwise Alignments

Query, 687 a.a., flagellin, filament structural protein from Pseudomonas putida KT2440

Subject, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (532), Expect = 2e-58
 Identities = 142/338 (42%), Positives = 200/338 (59%), Gaps = 54/338 (15%)

Query: 1   MALTVNTNITSMSVQKNLNKSSDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKG 60
           MA+ VNTN+++M+ Q+ L  +++A  ++M RLSSG KINSAKDDAAGLQISNRL  Q +G
Sbjct: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60

Query: 61  LSVAVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALS 120
           L VAV+NANDGIS+AQTAEGAM  + NI+QRMR+L+LQSANGSNS  DR ++Q+E TAL+
Sbjct: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120

Query: 121 GELTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESISFGMKDVSATSMKGNYNEASVAG 180
            EL R+A TT+FGG  LL+GTF+  SFQ+GA++ E++   +KD+         ++ ++ G
Sbjct: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMR--------SDNALMG 172

Query: 181 GVATLQASVTGAAGKFGTNNAGSTSASVVGTAGAGVFDKPTIGAAAGNLVLNVGTTTTTI 240
           G  T QA+  G    +G   AG T  ++       + DK              G  T +I
Sbjct: 173 G-KTYQAA-NGKDKNWGV-EAGKTDLTIT------LKDK------------REGDVTISI 211

Query: 241 AAAAGDTLQDVVDNINLETSNTGVTASIDSATGALKLDGTQAFTIDASTDDVLSTALGLA 300
            A  GD ++++   IN +T    + AS+D   G L+L     FT +   D       G A
Sbjct: 212 NAKEGDDIEELATYINGQTDM--IKASVDE-EGKLQL-----FTDNNRID-------GAA 256

Query: 301 EAGGAQLSKTGTANLRDGVLGAGGAGNLTLGSTNIALV 338
             GGA            G LG G A ++T+ + ++  V
Sbjct: 257 TFGGALA----------GELGIGAAQDVTVDTLDVTTV 284



 Score =  130 bits (326), Expect = 1e-34
 Identities = 94/278 (33%), Positives = 144/278 (51%), Gaps = 30/278 (10%)

Query: 422 AQGDDLDAIVDNINNNGAGAVGSGTALTGVTAKNDNGRLVLTSANGQDIKLDNG--SGVT 479
           A  D+L+ + +  +  G   +    A        DNG  V+   N +D++ DN    G T
Sbjct: 118 ALNDELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVML--NIKDMRSDNALMGGKT 175

Query: 480 GQGALAAV---GLNSGTTKAGLV------ADTSISLNGVEVKFKKGDDMDSIAASINAAS 530
            Q A       G+ +G T   +        D +IS+N      K+GDD++ +A  IN  +
Sbjct: 176 YQAANGKDKNWGVEAGKTDLTITLKDKREGDVTISINA-----KEGDDIEELATYINGQT 230

Query: 531 TGVNASVVVNAGSSTLSLFADQDITVADGSNGTGLAA-LGLTAVAGKTSAVEMESTVSNL 589
             + ASV        L LF D +      + G  LA  LG+ A          + TV  L
Sbjct: 231 DMIKASV---DEEGKLQLFTDNNRIDGAATFGGALAGELGIGAA--------QDVTVDTL 279

Query: 590 NITDAQSAQQAIQVLDGAMQSLDSQRSQLGAVQNRFDSTVANLQSISENSTAARSRIQDA 649
           ++T    AQ+++ ++D A++ +DS R++LGA QNRF+  + NL +I+EN  A++SRI+D 
Sbjct: 280 DVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNRFNHAINNLDNINENVNASKSRIKDT 339

Query: 650 DFAAETAELSKQQTLQQASTAILSQANQLPSSVLKLLG 687
           DFA ET  L+K Q L QAS+++L+QA Q P+S L LLG
Sbjct: 340 DFAKETTALTKAQILSQASSSVLAQAKQAPNSALALLG 377