Pairwise Alignments

Query, 687 a.a., flagellin, filament structural protein from Pseudomonas putida KT2440

Subject, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

 Score =  207 bits (527), Expect = 7e-58
 Identities = 133/321 (41%), Positives = 180/321 (56%), Gaps = 44/321 (13%)

Query: 1   MALTVNTNITSMSVQKNLNKSSDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKG 60
           MA+ VNTN+ +M+ Q+ L  +++A  T+M RLSSG KINSAKDDAAGLQISNRL  Q +G
Sbjct: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60

Query: 61  LSVAVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALS 120
           L VAV+NANDGISIAQTAEGAM  + NI+QRMR+L+LQSANGSNS  +R ++Q+E TAL+
Sbjct: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120

Query: 121 GELTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESISFGMKDV-SATSMKGNYNEASVA 179
            EL RIA TT+FGG  LL+GTFS  SFQ+GA++ E++   +KD+ S   M G  +  +  
Sbjct: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAE 180

Query: 180 GGVATLQASVTGAAGKFGTNNAGSTSASVVGTAGAGVFDKPTIGAAAGNLVLNVGTTTTT 239
           G     +          G N+   T   + G                          T T
Sbjct: 181 GKDKDWKVQA-------GANDITFTLKDIDG-----------------------NDQTIT 210

Query: 240 IAAAAGDTLQDVVDNINLET----------SNTGVTASIDSATGALKLDG--TQAFTIDA 287
           + A  GD +++V   IN +T              + A  +  TG +   G    A  + A
Sbjct: 211 VNAKEGDDIEEVATYINGQTDMVKASVNEKGQLQIFAGNNKVTGDVAFSGGLAGALNMQA 270

Query: 288 STDDVLSTALGLAEAGGAQLS 308
            T + + T + +   GGAQ S
Sbjct: 271 GTAETVDT-IDVTSVGGAQQS 290



 Score =  132 bits (333), Expect = 2e-35
 Identities = 109/371 (29%), Positives = 174/371 (46%), Gaps = 27/371 (7%)

Query: 331 GSTNIALVATDTLSSVVGKVNAQTGTTGVTASIDSATGQLKLNSAAGFDVGGTAGTLTGL 390
           G+TN    + + LSS     +A+    G+  S         L+ A      G +   T  
Sbjct: 20  GATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVAVRNANDGISIAQTAE 79

Query: 391 GLTAGSVAIAPQTTGLASAASIDINGTTFNFAQGDDLDAIVDNINNNGAGAVGSGTALTG 450
           G    +  I  +   L+  ++   N  +   A  +++ A+ D +N         G  L  
Sbjct: 80  GAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELNRIAETTSFGGNKLLN 139

Query: 451 VTAKN-------DNGRLVLTSANGQDIKLDNGSGVTGQGALAAVGLNSGTTKAGLVADTS 503
            T          DNG  V+ +   +D++ DN   + G   +AA G +          D +
Sbjct: 140 GTFSTKSFQIGADNGEAVMLTL--KDMRSDNRM-MGGTSYVAAEGKDKDWKVQAGANDIT 196

Query: 504 ISLNGVE-------VKFKKGDDMDSIAASINAASTGVNASVVVNAGSSTLSLFADQDITV 556
            +L  ++       V  K+GDD++ +A  IN  +  V ASV        L +FA  +   
Sbjct: 197 FTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASV---NEKGQLQIFAGNNKVT 253

Query: 557 ADGSNGTGLAALGLTAVAGKTSAVEMESTVSNLNITDAQSAQQAIQVLDGAMQSLDSQRS 616
            D +   GLA   L   AG         TV  +++T    AQQ++ V+D A++ +DS R+
Sbjct: 254 GDVAFSGGLAG-ALNMQAGTAE------TVDTIDVTSVGGAQQSVAVIDSALKYVDSHRA 306

Query: 617 QLGAVQNRFDSTVANLQSISENSTAARSRIQDADFAAETAELSKQQTLQQASTAILSQAN 676
           +LGA QNRF+  ++NL +I+EN  A++SRI+D DFA ET  L+K Q L QAS+++L+QA 
Sbjct: 307 ELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQAK 366

Query: 677 QLPSSVLKLLG 687
           Q P++ L LLG
Sbjct: 367 QAPNAALSLLG 377