Pairwise Alignments
Query, 687 a.a., flagellin, filament structural protein from Pseudomonas putida KT2440
Subject, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056
Score = 203 bits (517), Expect = 1e-56
Identities = 138/370 (37%), Positives = 191/370 (51%), Gaps = 63/370 (17%)
Query: 1 MALTVNTNITSMSVQKNLNKSSDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKG 60
MA+ VNTN+++M+ Q+ LN ++D + +M RLSSG KINSA+DDAAGLQISNRLT+Q +G
Sbjct: 1 MAINVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRG 60
Query: 61 LSVAVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALS 120
L +AVKNANDGISIAQTAEGAM + NI+QRMR+LALQS+NGSNS +R ++Q+E +AL+
Sbjct: 61 LDMAVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALN 120
Query: 121 GELTRIANTTTFGGRNLLDGTFSGSSFQVGANSNESISFGMKDVSATSMKGNYNEASVAG 180
EL RIA TT+FGG LL+G+F SFQ+GA+S E++ M G+ + A
Sbjct: 121 DELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSM---------GSMRSDTQAM 171
Query: 181 GVATLQASVTGAAGKFGTNNAGSTSASVVGTAGAGVFDKPTIGAAAGNLVLNVGTTTTTI 240
G + +A G A + A + S G TI
Sbjct: 172 GGKSYRAQ-EGKAADWRVGAATDLTLSYTNKQGE--------------------AREVTI 210
Query: 241 AAAAGDTLQDVVDNINLETSNTGVTASIDSATGALKLDGTQAFTIDASTDDVLSTALGLA 300
A GD L+++ IN T+DV ++ +
Sbjct: 211 NAKQGDDLEELATYIN------------------------------GQTEDVKAS---VG 237
Query: 301 EAGGAQLSKTGTANLRDGVLGAGGAGNLTLGSTNIALVATDTLSSVVGKVNAQTGTTGVT 360
E G QL + D +G G G + + VA +S+V G A + G
Sbjct: 238 EDGKLQLFASSQKVNGDVTIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGAL 297
Query: 361 ASIDSATGQL 370
++DS L
Sbjct: 298 KAVDSQRASL 307
Score = 135 bits (339), Expect = 4e-36
Identities = 91/276 (32%), Positives = 138/276 (50%), Gaps = 27/276 (9%)
Query: 422 AQGDDLDAIVDNINNNGAGAVGSGTALTGVTAKNDNGRLVLTSANGQ--DIKLDNGSGVT 479
A D+L+ I + + G + D+G V+ S D + G
Sbjct: 118 ALNDELNRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYR 177
Query: 480 GQGALAAVGLNSGTTKAGLVADTSISLNG-------VEVKFKKGDDMDSIAASINAASTG 532
Q AA + G D ++S V + K+GDD++ +A IN +
Sbjct: 178 AQEGKAA------DWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTED 231
Query: 533 VNASVVVNAGSSTLSLFADQDITVADGSNGTGLAA-LGLTAVAGKTSAVEMESTVSNLNI 591
V ASV L LFA D + G GL +G A TV+++N+
Sbjct: 232 VKASV---GEDGKLQLFASSQKVNGDVTIGGGLGGEIGFDA--------GRNVTVADVNV 280
Query: 592 TDAQSAQQAIQVLDGAMQSLDSQRSQLGAVQNRFDSTVANLQSISENSTAARSRIQDADF 651
+ +Q+A+ +LDGA++++DSQR+ LGA QNRF ++NL +++EN A+RSRI+D D+
Sbjct: 281 STVAGSQEAVSILDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDY 340
Query: 652 AAETAELSKQQTLQQASTAILSQANQLPSSVLKLLG 687
A ET ++K Q LQQAST++L+QA Q PS+ L LLG
Sbjct: 341 ARETTAMTKAQILQQASTSVLAQAKQSPSAALSLLG 376
Score = 33.5 bits (75), Expect = 2e-05
Identities = 72/355 (20%), Positives = 139/355 (39%), Gaps = 70/355 (19%)
Query: 229 LVLNVGTTTTTIAA-----AAGDTLQDVVDNINLETSNTGVTASIDSATGALKLDG---T 280
+ +NV T + + A A D +Q ++ ++ S + ++ D A G L++ +
Sbjct: 1 MAINVNTNVSAMTAQRYLNGAADGMQKSMERLS---SGYKINSARDDAAG-LQISNRLTS 56
Query: 281 QAFTIDASTDDVLSTALGLAEAGGAQLSKTGTA--NLRDGVLGAGGAGNLTLGSTNIALV 338
Q+ +D + + + + +A+ +++T +RD L + N S++
Sbjct: 57 QSRGLDMAVKNA-NDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSN----SSSERRA 111
Query: 339 ATDTLSSVVGKVNAQTGTTGVTASIDSATGQLKLNSAAG---FDVGGTAGTLTGLGLTAG 395
+ +S++ ++N TT S G LN + G F +G +G L + G
Sbjct: 112 IQEEVSALNDELNRIAETT-------SFGGNKLLNGSFGSKSFQIGADSGEAVMLSM--G 162
Query: 396 SVAIAPQTTG---------------LASAASIDINGT---------TFNFAQGDDLDAIV 431
S+ Q G + +A + ++ T T N QGDDL+ +
Sbjct: 163 SMRSDTQAMGGKSYRAQEGKAADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELA 222
Query: 432 DNINNNGAGAVGS----GTALTGVTAKNDNGRLVLTSANGQDIKLDNGSGV--------T 479
IN S G +++ NG + + G +I D G V T
Sbjct: 223 TYINGQTEDVKASVGEDGKLQLFASSQKVNGDVTIGGGLGGEIGFDAGRNVTVADVNVST 282
Query: 480 GQGALAAVGLNSGTTKAGLVADTSISLNGVEVKFKKG-DDMDSIAASINAASTGV 533
G+ AV + G KA V SL + +F ++D++ ++NA+ + +
Sbjct: 283 VAGSQEAVSILDGALKA--VDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRI 335