Pairwise Alignments

Query, 452 a.a., flagellar filament capping protein from Pseudomonas putida KT2440

Subject, 666 a.a., flagellar hook-associated protein 2 from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (263), Expect = 3e-27
 Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 12/209 (5%)

Query: 8   GIGSGVDTQSIVKALADAEKAPKQQQITTQQKTTTTQVSAVGMIKNALDTFRSAIAKLNT 67
           G+ +G D   +V  +  AE+ PKQQ+I  ++    T +SA G ++ +LDT ++ + +   
Sbjct: 7   GMNTGFDINGMVSKIVSAERVPKQQRIDNERTNIDTSISAYGRLRESLDTMKNLMTQFRQ 66

Query: 68  STSFTGLAGTSSDEKVAKATVTASASAGNYALEVTQLATSSKITTDVFAGGVSSVVNNSG 127
             +F      +S+E+V  AT T  A AGNY+++V QLA S KI ++V             
Sbjct: 67  EKAFAVRKVDTSNEQVVSATATTEAIAGNYSVDVLQLAQSHKIASEVLDKDAKF------ 120

Query: 128 DPQTLTISQSSADYNVTIPDGATLQQVRDLINKQLGSQGINANILTDAKGSRLVMSSSTT 187
            P  L IS     + + +   + L  +   IN +  + G+ A+I+ D +G RL+++S+ +
Sbjct: 121 GPGKLHISLGDKSFTLDVQGNSKLVDIVRGINGEKSNPGVRASIINDVEGPRLIVASNVS 180

Query: 188 GEGSDITLSGDSSLVQNATPGAPAQNAKY 216
           G+   + +S        A PG P +  +Y
Sbjct: 181 GKDHSVKMSA------QAEPGNPLKQLEY 203



 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 68/240 (28%), Positives = 117/240 (48%), Gaps = 13/240 (5%)

Query: 211 AQNAKYTIDGLE-LESKSNTVTGAISGVNFELLA-----EGKSRLSVATNTTTLKTSVQS 264
           AQ++   +DG+  L S +N +  AI GVN  L       +  + + +  +   ++  ++ 
Sbjct: 430 AQDSMVVLDGVATLSSNNNIIENAIEGVNLTLKGKTDRNQPPAEIGIEYDRERVRNDIEQ 489

Query: 265 FVSAYNALITAINTQTKVTATGDASTTTAGALTGDATMRALVSTVRNELVKSTGAG--SI 322
           FV+AYN         +K  A  D  T  AG L GD+ +R+  S ++     S      ++
Sbjct: 490 FVAAYNQFFQT----SKELAGVDPRTGQAGPLAGDSIVRSADSRLKTVFSSSIEQAPENL 545

Query: 323 SMLSQMGINTDQQTGLLVLDDTKWDKAVAKGAADIAAVFTGDKGLIKRMTAATDAYTGTT 382
             L++ GI T +Q G L ++    D+ +      +   F G++G  KR+  A  + TG T
Sbjct: 546 KSLTEFGITTTRQ-GTLEINYAMLDRQLNNNFTKLGEFFGGNQGFAKRVEDAISSMTGVT 604

Query: 383 GILATRTKNLNDNLTELTKQQEALDRRIETLTATLTAKYNAMDTLVAKLNATSSSVMTTL 442
           G + TR K+LN+    L   Q +LDRR+E+L     AK++AM    +K+ +  + +M  L
Sbjct: 605 GSIRTREKSLNEQTYRLDDDQRSLDRRMESLEKRTHAKFSAMQDATSKMQSQLAGMMNAL 664