Pairwise Alignments

Query, 405 a.a., Sensory box histidine kinase FleS from Pseudomonas putida KT2440

Subject, 550 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score = 85.9 bits (211), Expect = 3e-21
 Identities = 82/321 (25%), Positives = 135/321 (42%), Gaps = 47/321 (14%)

Query: 120 WRQVIARSFAPRKDDGHEVSLRDGRRLSIATRSLDAEPGQLVLLNDLTETRRLQDQLARH 179
           W ++    F+P      E  LRDGR L + T +LD   G +    D+TE +R QD L   
Sbjct: 241 WDRIEGFVFSPGTT---ERPLRDGRTLGVETFALDGG-GWVRTFTDITEGKRAQDALLVS 296

Query: 180 ERLSSLGRMVASLAHQIRTPLSAAMLYAGHLADNEQALSAQTRQRFAATLKERLHELEHQ 239
           E+++SLG++VA +AH+I TP+   +  A  LA+  Q+L         A  + +L    H 
Sbjct: 297 EKMASLGQLVAGIAHEINTPIGTGVTAASLLAEKTQSLVQAVEA--GALRRSQLDAYLHV 354

Query: 240 VRDMLVFARGELPLGDRVTPKALFQALQQAAQAHVQGHAVRWQCDSHLGELLCN------ 293
            R+   F      L +      L Q+ +Q A       +  ++   +L E+L +      
Sbjct: 355 ARESSRFI-----LSNLTRAAELIQSFKQVAVDQATDESRLFKVRDYLEEILLSLQPRLK 409

Query: 294 ---------------------------RDTLVGALLNLIENALQASDGPARLKVHLYRRE 326
                                       + ++ +L++ +E    A  G   L+V   +  
Sbjct: 410 RTPHTMTLECPDDLAMYGPPGALFRVITNLVINSLMHGLEEGATAPPGHMVLRVGHEKDT 469

Query: 327 RSLHLCVSDAGSGIDAGLLGRLGEPFLTTK--ATGTGLGLAVV-KAVVRAHQGTINLRSK 383
             +     D G GI    L R+ +PF TT+    GTGLGL +V   V +   G++ + S 
Sbjct: 470 DCVVFRYHDTGRGIPEKNLKRIFDPFFTTRRGEGGTGLGLHIVYNLVTQTLGGSLAVHSP 529

Query: 384 VGRGTCVRVELPLIDGQLAEG 404
            G+G    + +P +   L EG
Sbjct: 530 PGQGAIFLIRVPRLSAGLPEG 550



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 68  DELSEKERLANRLQNL------LDLLPGGVIVIDGQGLVREANPAACELLG 112
           + L + +  A+RL  L      ++ +  GV+V D +  V   N  ACELLG
Sbjct: 21  ESLPQSDGSADRLTGLSLHSLVIEHMDQGVLVADAKTRVIAWNRRACELLG 71