Pairwise Alignments

Query, 405 a.a., Sensory box histidine kinase FleS from Pseudomonas putida KT2440

Subject, 901 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 89.7 bits (221), Expect = 3e-22
 Identities = 95/370 (25%), Positives = 162/370 (43%), Gaps = 52/370 (14%)

Query: 72  EKERLANRLQNLLDLLPGGVIVIDGQG-LVREANPAACELLGEPLIGQ-LWR-------- 121
           E ER   R   +LD L   V V D +   +   N A   + G   +G+  W         
Sbjct: 537 ELERSQERFMAVLDGLDSAVYVADAKSDEILFGNRAFKSIFGFDAVGRNCWEVTEACRPP 596

Query: 122 --------QVIARSFAPRK-DDGHEVSLRDGRRLSIATRSLDAEPGQLVLLN---DLTET 169
                   ++++    PR+  DG   +   GR   +  R++    G++V +    D+TE 
Sbjct: 597 VGAFDCDLRLLSPEVLPRQLFDGEVQNSLSGRWYHLHDRAIRWVDGRVVRVQIGTDITER 656

Query: 170 RRLQD-------QLARHERLSSLGRMVASLAHQIRTPLSAAMLYA--------GHLADNE 214
           +++++       +L +  RL ++G M +SLAH++  PL+A   Y         G  A  E
Sbjct: 657 KQIEEVNLQQQKRLEQTSRLITMGEMASSLAHELNQPLAAIANYCMGCVKRMKGGAAKPE 716

Query: 215 QALSAQTRQRFAATLKERLHELEHQVRDMLVFA---RGELPLGDRVTPKALFQALQQAAQ 271
           + L A  +  F A   ER  ++  ++R+ +      RG++ LGD V     F  ++    
Sbjct: 717 ELLGAMEKASFQA---ERAGKIIRRMREFVKKNEPNRGQVLLGDIVEEALGFAEIE---- 769

Query: 272 AHVQGHAVRWQCDSHLGELLCNRDTLVGALLNLIENALQASDG--PARLKVHLYRR---E 326
           A   G  +       L  L  +R  +   LLNL++N ++A     PA  ++ +       
Sbjct: 770 ARKLGVNICVDLPPELPPLFADRIMIEQVLLNLVKNGIEAMRDTLPAERRLTVSATLPDN 829

Query: 327 RSLHLCVSDAGSGIDAGLLGRLGEPFLTTKATGTGLGLAVVKAVVRAHQGTINLRSKVGR 386
            SL + V+D G G+ +     L  PF TTK  G G+GL + ++++  H+G +   +  G 
Sbjct: 830 HSLEVAVADRGHGLGSTTAEELFAPFYTTKPEGMGMGLPICRSIIEYHKGRLWADANPGG 889

Query: 387 GTCVRVELPL 396
           GT  R  LPL
Sbjct: 890 GTVFRFTLPL 899



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 25/116 (21%)

Query: 90  GVIVIDGQGLVREANPAACELLG---EPLIG-----QLWRQVIARSF-----------AP 130
           G+  ID +G +   NPA C +LG     L+G       W    AR             AP
Sbjct: 427 GLRAIDMEGRIIYVNPAFCRMLGWSEAELLGLKPPFPYWPPEHARQLATNIELTLAGQAP 486

Query: 131 RKDDGHEVSLRDGRRLSI---ATRSLDA---EPGQLVLLNDLTETRRLQDQLARHE 180
            K     V  ++G R+ +    +  +DA   + G +  + D+TE +R++ +L R +
Sbjct: 487 AKGFEQRVMRKNGERMDVRFYISPLIDANGKQTGWMGAMTDITEPKRVRGELERSQ 542