Pairwise Alignments

Query, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

Subject, 470 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  302 bits (774), Expect = 1e-86
 Identities = 182/454 (40%), Positives = 258/454 (56%), Gaps = 33/454 (7%)

Query: 5   VLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEDAFSLVVSDVNMPGMDGHQL 64
           +L+VED+ ++R AL   LE   +     GS +EA E      F L+VSD+ +PG  G +L
Sbjct: 4   ILIVEDETIIRSALRRLLERNQYEVSEAGSVQEAQERYSIPGFDLIVSDLRLPGAPGTEL 63

Query: 65  LSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLNLVER-------- 116
           +    +     PVL+MT++A++  AV++M+ GA DY+ KPF+   +L  V R        
Sbjct: 64  I----KLAEGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQTVARILSDHQQS 119

Query: 117 -------------HAAGRVTGEEGPVACEPASRQLLELAARVARSDSTVLISGESGTGKE 163
                         AAG    + G +      + L     +VA +DS VLI GESGTGKE
Sbjct: 120 AAVQAQPARSASATAAGSGRDDIGIIGHCAPMQDLFGKIRKVAPTDSNVLIQGESGTGKE 179

Query: 164 VLARYIHQQSPRAAQPFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGT 223
           ++AR +H  S RA  P +++NCAAIP+ ++E+ LFGHEKGAFTGA A +AG  E A+GGT
Sbjct: 180 LVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAGLVEAADGGT 239

Query: 224 LLLDEISEMPMALQAKLLRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFRE 283
           L LDEI E+P+  QA+LLRVLQE E+ RVG  +   +D+R++A T+RDL      G+FRE
Sbjct: 240 LFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKTLAKTGQFRE 299

Query: 284 DLYYRLSVFPLAWRPLRERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPG 343
           DLYYRL V  L   PLRER  D+L++A+  LAR   +M    +  S  A   ++ Y+WPG
Sbjct: 300 DLYYRLHVIALKLPPLRERGSDVLEIAKAFLARQGERMGSDDLHFSRDAEQAIRHYSWPG 359

Query: 344 NVRELDNALQRALILQQGGVIEAADFCLAGAIPLSA----GTEP--SLEVVADAGGLGDD 397
           NVREL+NA++RA IL +   I+A    L   I L        EP  S+  +A++    +D
Sbjct: 360 NVRELENAIERAAILSESPEIDAE--LLGIDIELDELDDDFDEPLGSIRGIANSNEPTED 417

Query: 398 MRRHEYQMIIDTLRAERGRRKEAAERLGISPRTL 431
           +   +Y         +     E A +LGIS + L
Sbjct: 418 LSLEDYFQHFVLEHQDHMTETELARKLGISRKCL 451