Pairwise Alignments

Query, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

Subject, 449 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  298 bits (763), Expect = 2e-85
 Identities = 183/451 (40%), Positives = 243/451 (53%), Gaps = 35/451 (7%)

Query: 2   AIKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEDAFSLVVSDVNMPGMDG 61
           +++VLLVEDD  +R      L++      +V SAE+A   +  D   +VVSD+ +PGMDG
Sbjct: 6   SLQVLLVEDDPDVRLGCEQALQLEDIPVSSVDSAEKARRRLTRDFPGIVVSDIRLPGMDG 65

Query: 62  HQLLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLNLVER----- 116
             LL +L+   P+LPV+L+T H  V  AV+AM+ GA D++ KPF P  L+ +V R     
Sbjct: 66  MALLKELQAIDPELPVVLITGHGDVSLAVQAMKGGAHDFIEKPFSPDYLVEVVRRALDKR 125

Query: 117 -----------HAAGRVTGEEGPVACEPASRQLLELAARVARSDSTVLISGESGTGKEVL 165
                          R T E   +   PA  ++ +L A +  S + +LI GE+GTGKE+ 
Sbjct: 126 RLTLEVRQLRARLESRDTLEARLIGRSPAMVKVRQLVADLGNSAADILIFGETGTGKELA 185

Query: 166 ARYIHQQSPRAAQPFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLL 225
           AR +H+  PR    FVAINC  +P+ + E+ +FGHE GA+TGA   + GK E A GGTL 
Sbjct: 186 ARCLHEAGPRRNGNFVAINCGGLPETLFESEIFGHEAGAYTGAAKKRIGKIEHASGGTLF 245

Query: 226 LDEISEMPMALQAKLLRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDL 285
           LDEI  MPMA+Q KLLRVLQER +ER+G   PI +D RV+A T  DL      GRFR DL
Sbjct: 246 LDEIESMPMAMQIKLLRVLQERSLERLGSNTPIPVDCRVIAATKADLKELSDQGRFRADL 305

Query: 286 YYRLSVFPLAWRPLRERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNV 345
           YYRL+V  L   PLRER  DI  L E  L +  A+ +       PA    L AY WPGNV
Sbjct: 306 YYRLNVATLPLPPLRERREDIPLLFEHFLLQAAARHERPVPAADPARMGPLLAYDWPGNV 365

Query: 346 RELDNALQRALILQQGGVIEAADFCLAGAIPLSAGTEP-SLEVVADAGGLGDDMRRHEYQ 404
           REL N                AD C+ G   + AG  P + E       L + +   E  
Sbjct: 366 RELRN---------------VADRCVLG---IEAGVAPFTAESPTQKRSLAETVDSFERA 407

Query: 405 MIIDTLRAERGRRKEAAERLGISPRTLRYKL 435
           +I + L   +G     AE L I+  TL  K+
Sbjct: 408 LITEALERNQGSLARTAEDLRIAKTTLHDKI 438