Pairwise Alignments

Query, 592 a.a., Flagellar M-ring protein from Pseudomonas putida KT2440

Subject, 558 a.a., flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) from Pseudomonas stutzeri RCH2

 Score =  268 bits (685), Expect = 4e-76
 Identities = 202/580 (34%), Positives = 300/580 (51%), Gaps = 68/580 (11%)

Query: 35  PMLRQIGLLVGLAASVAIGFAVVLWSQQPDYRPLYGSLSGMDTKQVMDTLAAADIPYNVE 94
           P +   G+ V +AA++A+  A  LW     +RPL+G+       +VM  L    + Y + 
Sbjct: 18  PRVTLAGMAV-IAAALAVAVAFYLWRDNGSFRPLHGAGESFPAAEVMQILDGEALQYRIH 76

Query: 95  PNSGALLVKADDLSRARLKLAAAGVAPSDGNVGFELLDKEQGLGTSQFMEATRYRRSLEG 154
           P SG +LV+ D L++ARL L A GV  +    G+EL DKE+ LGTSQF++  R +RSLEG
Sbjct: 77  PQSGQILVREDQLAQARLLLNAKGVKVAQP-AGYELFDKEEPLGTSQFVQDVRLKRSLEG 135

Query: 155 ELARTVSSLNNVKAARVHLAIPKSSVFVRDERKPS-ASVLVELYPGRALEAGQVMAIVNL 213
           ELARTV +L  V+ ARVHLA  ++S FV  +R PS ASV+++L PG  L + QV AIVNL
Sbjct: 136 ELARTVMALKGVQQARVHLAQEENSSFVVSKRAPSKASVMLQLEPGYKLSSDQVGAIVNL 195

Query: 214 VATSVPELDKSQVTVVDQKGNLLSEQIQDSALTQAGKQF--DYSRRVESMLTQRVHNILQ 271
           VA SVP L    V VVDQ G LLS  +          Q   DY ++    + Q    +L 
Sbjct: 196 VANSVPNLKPEDVGVVDQYGALLSRGLNVGGGPAQNWQAVEDYQQKAAGNIEQ----VLA 251

Query: 272 PVLGNDRYKAEVSADLDFSAVESTSEQFNPDQPALRSEQSVDEQRASSQGPQGVPGALSN 331
           PVLG   ++  V+AD+DFS  E T + +  D P LR+E   +E  A  +   GVPG+LSN
Sbjct: 252 PVLGLGNFRISVAADIDFSQKEETFQSYG-DTPRLRNEVLRNES-ALDRLALGVPGSLSN 309

Query: 332 QPPGAASAPQTTGGAATPAAAIQPGQPLVDANGQQIMDPATGQPMLAPYPSDKRQQSTKN 391
           +P      P+  G  A                 QQ+     G   L       R++ST+ 
Sbjct: 310 RP----LPPEPDGEEA-----------------QQLATENKGATSL-------REESTRQ 341

Query: 392 FELDRSISHTRQQQGRMARLSVAVVVDDQVKIDPATGDTTRAPWGAEDLARFTRLVQDAV 451
            + D+S+ H +     + + SVAVV++        +    +  W  E  A    +V++AV
Sbjct: 342 MDYDQSVVHVKHAGFALRQQSVAVVLN--------SAAAPKGGWTDEARAEMEAMVRNAV 393

Query: 452 GFDASRGDSVTVINVPFAA-DRGEEIADIAFYQQPWFWDIVKQVLGVVFILVLVFGVLRP 510
           GF   RGD +++  +PFAA ++ E++  + +++      + K  +  +  L+L+  V+RP
Sbjct: 394 GFKQERGDLLSLSVLPFAAVEQIEQV--VPWWENSQIHALAKVGVAGLIALLLLLIVVRP 451

Query: 511 VLNNITGGGKQAAPDSD------MELGGMMGLDGE----LANDRVSLG-------GPTS- 552
            + N+T    QA P  +      +E      L+G+    LA+ R S G        P S 
Sbjct: 452 AVRNLTQRNVQALPQGEGLEGSLVEPSAPAALEGDARPALASPRESNGPHIFGELNPLSE 511

Query: 553 ILLPSPSEGYEAQLNAIKGLVAEDPGRVAQVVKDWINADE 592
           I LP+P  G E Q+  ++ L   DP RV++V+K WI  +E
Sbjct: 512 IRLPAPGSGLELQIEHLQMLAKNDPERVSEVIKHWIGRNE 551