Pairwise Alignments

Query, 263 a.a., Flagellar assembly protein FliH from Pseudomonas putida KT2440

Subject, 339 a.a., flagellar assembly protein FliH (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (250), Expect = 3e-26
 Identities = 78/271 (28%), Positives = 116/271 (42%), Gaps = 40/271 (14%)

Query: 23  WTLPSFDP---EPEPEPEPEPEPEVIEEVEEVPLEEVQPLTLEELEAIRQEAYNEGFATG 79
           W LP   P   EP+        P+   +  + P   V P TLEE+E+IR EA  EGFA G
Sbjct: 25  WQLPDVTPVVHEPKENMFGRIAPQKAAKAVDEP---VMPPTLEEIESIRAEAEAEGFAQG 81

Query: 80  ER--------------------EGFHSTQLKVRQEAEEALKTKLDSLERLMANLMEPIAE 119
           +                     EG+   Q +  +      K  +   E LM  L  P++ 
Sbjct: 82  QEAGMAKGLEEGRLKGLEQGHEEGYRQGQAQGMEAGLVEAKQTIAHFEALMQQLSMPLSL 141

Query: 120 QDTQIEKSLVHLIAHMSRQVIGRELRNDSSQITQVLREALKLLPMGADNIRIHLNPQDFE 179
            DT+IE++LV L   +++ VIG EL+     I   LR+ +  LP+      + L+P+D  
Sbjct: 142 LDTEIEQALVQLSMTLAKAVIGHELKTHPEHILAALRQGVDALPLKEQGAHLRLHPEDLA 201

Query: 180 LAKALRERHE---ENWRLLEDSTLLPGGCRIETAHSRIDATMETRI-----------EKA 225
           + + L E  +    +W L  D TL  G C +  + SR+D  +E RI           ++ 
Sbjct: 202 IVERLYESAQLTKNHWELEADPTLSRGECIVSNSRSRVDMGLEHRIKAVFDKLIASEQRL 261

Query: 226 VTQLFDQLHDHSLHPAAPDMSIDLDAPAERA 256
             Q   QL      P   D + DLD  A +A
Sbjct: 262 EQQRLQQLAAMEKVPEHQDQNQDLDGDAAQA 292