Pairwise Alignments

Query, 380 a.a., flagellin export apparatus, substrate specificity protein from Pseudomonas putida KT2440

Subject, 376 a.a., flagellar biosynthesis protein FlhB from Vibrio cholerae E7946 ATCC 55056

 Score =  343 bits (880), Expect = 5e-99
 Identities = 183/380 (48%), Positives = 268/380 (70%), Gaps = 8/380 (2%)

Query: 1   MAESESGQDKTEDPTEKRKRDAREKGEVARSKELNTVAVTLAGAGGLLAFGGHVAETLLA 60
           MAES+ GQ++TE+ T +R + A+EKG+VARSKEL +V+V + GA  L+ FG  +A+ L+ 
Sbjct: 1   MAESD-GQERTEEATPRRLQQAKEKGQVARSKELASVSVLVVGAVSLMWFGEILAKGLMV 59

Query: 61  LMRMNFSLTRDIIVDERAMGAFLLASGKMAIWAVQPVLILL---FVVSFVAPIALSGFLF 117
            M+  F L+R+ I D   +G      G   +  + P+L++L   F+ + +    + G  F
Sbjct: 60  AMQRLFELSREEIFD---LGKLFDIIGGSLVNLLLPLLMILSTLFIAALIGAAGVGGISF 116

Query: 118 SGSLLQPKFSRMNPLSGIKRMFSMQALTELLKALAKFFVILVVAVVVLSGDRQALLSIAN 177
           S     PK S+MNPLSG+KRMF MQ+  ELLK++ K  ++  VA  ++   ++ L  ++ 
Sbjct: 117 SAEAAMPKLSKMNPLSGLKRMFGMQSWVELLKSILKVLLVSGVAFYLIEASQKDLFQLSL 176

Query: 178 EPLEQAIIHSLQVVGWSALWMSAGLLLIAAADVPFQLYQTHKKMKMTKQEVRDEYKDSEG 237
           +   Q I H+L ++    L +S  LL++ A D+PFQ++Q  +++KMTKQEV+DEYKD+EG
Sbjct: 177 DVYPQNIFHALDILLNFVLLISCSLLVVVAIDIPFQIWQHAEQLKMTKQEVKDEYKDTEG 236

Query: 238 KPEVKQRIRQLQREVSQRRMMAAVPDADVIITNPTHYAVALQYDPEKGGAAPLLLAKGSD 297
           KPEVK RIR LQRE +QRRMMAA+P ADVIITNP H++VAL+Y  +    AP+++AKG D
Sbjct: 237 KPEVKGRIRMLQREAAQRRMMAALPQADVIITNPEHFSVALRY-KQNTDKAPVVIAKGVD 295

Query: 298 FMALKIREIGVEHNIQILESPALARAIYYSTELEQEIPAGLYLAVAQVLAYVFQIRQYRA 357
            MALKIREI  E++I I+ +P LARA+Y++TELEQ+IP GL++AVAQVLA+VFQ++QYR 
Sbjct: 296 HMALKIREIAREYDIAIVPAPPLARALYHTTELEQQIPDGLFVAVAQVLAFVFQLKQYRR 355

Query: 358 GKGKRPEPLKDDLPIPPDLR 377
             G+RP+  ++++PIPPD+R
Sbjct: 356 KGGQRPKLNEENMPIPPDMR 375