Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 308 a.a., D-alanine--D-alanine ligase from Sinorhizobium meliloti 1021

 Score =  149 bits (377), Expect = 7e-41
 Identities = 115/340 (33%), Positives = 166/340 (48%), Gaps = 61/340 (17%)

Query: 1   MKQNVIALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPG 60
           M    +A++ GG SSE  V+L S      AL A G+RV  V + R               
Sbjct: 1   MSSKHVAVLLGGFSSERPVSLSSGTACADALEAEGYRVTRVDVGR--------------- 45

Query: 61  AVDRSAPLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPC 120
             D +A L  +RP                   D++F ALHG +GEDGTIQG+     +P 
Sbjct: 46  --DVAAVLQELRP-------------------DVVFNALHGPFGEDGTIQGILEYLEIPY 84

Query: 121 VGSGVLGSAMAMDKDVTKRMVQSAGLVVVPWLAMN-----SMRPWEELVECLGSSTLFVK 175
             SGVL SA+AMDKD  K + ++AG+ V   L M+     +  P +            VK
Sbjct: 85  THSGVLASALAMDKDQAKHVAKAAGIPVAEALVMDRRSFGNQHPMK--------PPYVVK 136

Query: 176 PATSGSSIGVSRVSNALEYAAAFAIAA--REDTKVLVEAAVCGREIECGVLELEEGLMAS 233
           P   GSS GV  V     +      ++  R   +V+VE  + GRE  CGV+    G +A 
Sbjct: 137 PVREGSSFGVVIVKEDQSHPPQVITSSEWRYGDRVMVERYIAGREFTCGVM----GDVAL 192

Query: 234 VVGEIIKKEGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYAR 293
            V EII  +GHA+YDY +KY       + +P+ + P+I  +IQ L+++A + +  +G +R
Sbjct: 193 GVTEII-PQGHAFYDYDSKYVKGGSKHV-IPAQISPNIYQKIQTLALKAHQAIGCRGVSR 250

Query: 294 VDFFLTE----EGEIILNEINTLPGFTSASMYPKMFECSG 329
            DF   +    EGE+I  EINT PG T  S+ P+M + +G
Sbjct: 251 SDFRFDDRGDGEGELIWLEINTQPGMTPTSLVPEMAQHAG 290