Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 329 a.a., D-alanine--D-alanine ligase from Rhodopseudomonas palustris CGA009

 Score =  135 bits (341), Expect = 1e-36
 Identities = 112/339 (33%), Positives = 155/339 (45%), Gaps = 47/339 (13%)

Query: 8   LVFGGRSSEHSVALRSAATIHAALMALG-------HRVHCVGIDREGNWRYQGEPCQFPG 60
           ++FGG S E  V++ SA  +H+AL            RVH                     
Sbjct: 5   ILFGGTSKERLVSVASAQALHSALPDADLWFWNDDDRVH--------------------- 43

Query: 61  AVDRSAPLISIRPGHRSLSYTTQESGTVEIGID-------LLFPALHGRWGEDGTIQGLA 113
           AV   A L   RP   +     ++ G +E  +D       LL   LHG   E+G +Q + 
Sbjct: 44  AVSAQALLAHARPFEEAFVPDGEDIGPLETALDRAAAEQRLLVLGLHGGVAENGELQAMC 103

Query: 114 AMCGLPCVGSGVLGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSMRPWEELVECLGSSTLF 173
            +  +P  GSG   S +A DK   KR    AG+  V  +A+      E  +E  G   L 
Sbjct: 104 ELRRVPFTGSGSAASHLAFDKVAAKRFAAIAGVRTVTGIALADA---EAALEAHG--RLI 158

Query: 174 VKPATSGSSIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEG-LMA 232
            KPA  GSS G+  ++   +  A    A  ED   L+E  V G E  CGVLE E+G L A
Sbjct: 159 AKPACDGSSYGLFFINAKQDLVAVRHAAKTED--YLIEPFVAGVEATCGVLEAEDGSLRA 216

Query: 233 SVVGEIIKKEGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYA 292
               EI+  +G   +DY AKY + S   +  P    P+I + I   +V+A R +  +GY+
Sbjct: 217 LPPIEIVPADGG--FDYTAKYLAKSTQEI-CPGRFAPEIASAIMDYAVRAHRVMSCRGYS 273

Query: 293 RVDFFLTEEGEIILNEINTLPGFTSASMYPKMFECSGYP 331
           R DF + ++G I L E NTLPG T AS+YPK     G P
Sbjct: 274 RSDFIVGKDGPIFL-ETNTLPGLTKASLYPKALNALGIP 311