Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 334 a.a., D-alanyl-alanine synthetase A (RefSeq) from Shewanella loihica PV-4

 Score =  151 bits (381), Expect = 3e-41
 Identities = 103/329 (31%), Positives = 164/329 (49%), Gaps = 22/329 (6%)

Query: 6   IALVFGGRSSEHSVALRSAATIHAALMALGH-RVHCVGIDREGNWRYQ-GEPCQFPGAVD 63
           + L+ GG   EH+++L SA     +L  L H  V  V +D +G ++ + GE C+      
Sbjct: 6   LLLLCGGGGDEHAISLLSANYFETSLAKLPHLNVLRVELDAKGQYQSKSGERCELTN--- 62

Query: 64  RSAPLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPCVGS 123
                       R + +  ++       +D + P +HG  GE G IQ    +  LP  G 
Sbjct: 63  -----------RREIRF--EDESLAPWPVDYVIPCIHGYPGETGDIQSYFELINLPYFGC 109

Query: 124 GVLGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSM--RPWEELVECLGS-STLFVKPATSG 180
              GS    +K   K    + G+   P+L +N +  +   +  + L    ++FVK A+ G
Sbjct: 110 DAEGSRNCFNKITAKMWFSALGIPNTPYLFLNQLDEQAIAQTTDALAKWGSVFVKAASQG 169

Query: 181 SSIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEGLMASVVGEIIK 240
           SS+G  RV +A +  A  A A      V+VE  +  RE+E  V +     +A++ GE+I 
Sbjct: 170 SSVGCYRVDDAAQIPAILADAFHYSPYVVVEKTIQARELEVAVYQYRGETVATLPGEVIC 229

Query: 241 KEGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYARVDFFLTE 300
             G  +Y Y  KY ++S    +V + +  +I  +I+A +V+ F  ++L+  +R+DFFLT 
Sbjct: 230 AGG-TFYTYDEKYAADSKATTKVVAEVSDEIAQQIRAYAVKVFDGMKLRHLSRIDFFLTP 288

Query: 301 EGEIILNEINTLPGFTSASMYPKMFECSG 329
           EGEI+LNEINT PG T  SM+PKM    G
Sbjct: 289 EGEILLNEINTFPGLTPISMFPKMLANHG 317