Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 365 a.a., D-alanine--D-alanine ligase A from Klebsiella michiganensis M5al

 Score =  242 bits (617), Expect = 1e-68
 Identities = 143/358 (39%), Positives = 209/358 (58%), Gaps = 17/358 (4%)

Query: 6   IALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWR------YQGEPCQFP 59
           + +VFGG+S+EH V+L+SA  I  A+      V  +GID++G W       Y   P Q P
Sbjct: 6   VGIVFGGKSAEHEVSLQSAKNIVEAIDKTRFDVVLLGIDKQGQWHINDASNYLLNP-QDP 64

Query: 60  GAVDRSAPLISIR--PGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCG 117
             +      I++   PG  +      +SG     ID++FP +HG  GEDG++QG+  M  
Sbjct: 65  AHIALRPSDITLAQIPGREAQQLINADSGQPLAAIDVIFPIVHGTLGEDGSLQGMLRMAN 124

Query: 118 LPCVGSGVLGSAMAMDKDVTKRMVQSAGLVVVPWLAMN----SMRPWEELVECLGSSTLF 173
           LP VGS VLGSA  MDKDVTKR+++ AGL + P++ +     +   + E+   LG   LF
Sbjct: 125 LPFVGSDVLGSAACMDKDVTKRLLRDAGLSIAPFITLTRANRNQMSFAEVQAKLGLP-LF 183

Query: 174 VKPATSGSSIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEGLMAS 233
           VKPA  GSS+GVS+V++  +Y  A A+A   D KV+VE  + GREIEC VL   +   AS
Sbjct: 184 VKPANQGSSVGVSKVNSEEQYQQAVALAFEFDHKVVVEQGIKGREIECAVLG-NDNPQAS 242

Query: 234 VVGEIIKKEGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYAR 293
             GEI+      +Y Y  KY  +    + VP+ +  D+  +I+ ++V+A++ L   G AR
Sbjct: 243 TCGEIVLNS--EFYAYDTKYIDDQGAKVVVPAAIDSDVNDKIRQIAVRAYQTLGCSGMAR 300

Query: 294 VDFFLTEEGEIILNEINTLPGFTSASMYPKMFECSGYPPPKLVGALVEYGLSSASKER 351
           VD FLT E ++++NEINTLPGFT+ SMYPK+++ SG     L+  L+E  L   + +R
Sbjct: 301 VDVFLTAENDVVINEINTLPGFTNISMYPKLWQASGLDYTSLISRLIELALERHAADR 358