Pairwise Alignments

Query, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

Subject, 306 a.a., D-alanine--D-alanine ligase from Klebsiella michiganensis M5al

 Score =  147 bits (371), Expect = 4e-40
 Identities = 108/343 (31%), Positives = 163/343 (47%), Gaps = 51/343 (14%)

Query: 6   IALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPGAVDRS 65
           IA++FGG S+E  V+L S + + A L   G   H V                      R 
Sbjct: 5   IAVLFGGTSAEREVSLNSGSAVLAGLREAGVDAHPVD--------------------PRD 44

Query: 66  APLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPCVGSGV 125
             +  ++                 +G    F ALHGR GEDGT+QGL  +  LP  GSGV
Sbjct: 45  TDITQLK----------------NMGFQKAFIALHGRGGEDGTLQGLLELIQLPYTGSGV 88

Query: 126 LGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSMR-------PWEELVECLGSSTLFVKPAT 178
           + SA++MDK  +K + Q AGL V PW+A+   +         E+ +  LG   L +KP+ 
Sbjct: 89  MASAISMDKLRSKLLWQGAGLPVAPWVALTRKQFDAGLSAEVEQQISALG-LPLIIKPSR 147

Query: 179 SGSSIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEGLMASVVGEI 238
            GSS+G+S+V+ +     A A+A + D +VL+E  + G E    ++  E      ++  I
Sbjct: 148 EGSSVGMSKVNESCALQNALALAFQHDDEVLIEKWLSGPEFTVAIVGEE------ILPSI 201

Query: 239 IKKEGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYARVDFFL 298
             +    +YDY+AKY S+  T    P    P   + IQAL  +A+  L   G+ R+D  L
Sbjct: 202 RIQAAGTFYDYEAKYLSDE-TQYFCPGFEDPARESEIQALVQKAWESLGCYGWGRIDVML 260

Query: 299 TEEGEIILNEINTLPGFTSASMYPKMFECSGYPPPKLVGALVE 341
             +G+  L E NT PG TS S+ P     +G    +LV  +++
Sbjct: 261 DSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVRILD 303