Pairwise Alignments

Query, 709 a.a., flagellar export pore protein from Pseudomonas putida KT2440

Subject, 720 a.a., Flagellar biosynthesis protein FlhA (NCBI) from Rhodospirillum rubrum S1H

 Score =  517 bits (1331), Expect = e-151
 Identities = 271/690 (39%), Positives = 435/690 (63%), Gaps = 16/690 (2%)

Query: 20  GNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILL 79
           G   +P  L+ +L +++LP+P +LLD+    ++ LS+++L+  V+  + L+F+ FP +LL
Sbjct: 43  GEFALPFGLIAILVVLILPMPTWLLDIMLAMSLTLSVLILMTVVFIRKALEFSTFPMVLL 102

Query: 80  VATLLRLALNVASTRVVMLHGQEGHGAAGKVIQAFGEVVIGGNYVVGAVVFAILMIINFV 139
           + T+LRLALN+ASTR+++  G EG  AAG VI+AFG  ++GGN+V+G +VF+IL+++NF+
Sbjct: 103 ITTMLRLALNLASTRLILAQGHEGTAAAGHVIEAFGGFIMGGNFVIGVIVFSILVLVNFM 162

Query: 140 VVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKHRRAEVAQEAEFYGSMD 199
           V+TKGA RI+EV+ARFTLDAMPGKQMAIDADL++GLID+ +A+ RR E+ +E++F+G+MD
Sbjct: 163 VITKGATRIAEVTARFTLDAMPGKQMAIDADLSSGLIDETEARRRREEMQKESDFFGAMD 222

Query: 200 GASKFVRGDAIAGLLILFINLIGGMLIGMLQHNMSFSEAGKVYALLTIGDGLVAQLPSLL 259
           GASKFVRGDAIAG++I FIN+IGGM+IG+ Q++++FSEA   Y  LT+GDGLV+Q+P+L+
Sbjct: 223 GASKFVRGDAIAGIIITFINVIGGMIIGIAQNDLTFSEAANTYTALTVGDGLVSQIPALI 282

Query: 260 LSTAAAIMVTRASGSEDMGKLINRQMFDSPKALAVSGALMIVMGLVPGMPHIAFLSLGLM 319
           +S AA +MV++   +      +  Q    PKAL +S  L   + LVPG P + FL L  +
Sbjct: 283 ISVAAGVMVSKGGLTTTAETALIGQFTAYPKALGMSAFLAGALALVPGTPALPFLLLAGL 342

Query: 320 AAGGAYLVWKKQQQAKVKAQQEAQRQQDL----LPSPQRALETKELGWDDVTPIDMIGLE 375
             G A+  W  ++ + +K + EA+  Q+L    +P  +  + T          ID++ LE
Sbjct: 343 TGGAAW--WLNRKASNIK-RDEAEHAQELATQEIPVAEEPIST-------ALKIDLVRLE 392

Query: 376 VGYRLIPLVDRNQGGQLLARIKGVRKKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGVI 435
           +GY L+ L++     +L  +IK +R+ L+ D+GF+MP V I+DN+ L  + YR+ +  V 
Sbjct: 393 LGYGLLSLINTAHNQRLTDQIKALRRALATDMGFVMPPVRIQDNMQLAANTYRIYIKEVE 452

Query: 436 LAEAEIYPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRSQAQSLGYTVVDAST 495
               ++ P   L ++P     TL G    +P FGL AVW+D+  R +A   GYTVVD  T
Sbjct: 453 AGHGDLRPTMLLVMDPRGDEITLAGEKTHEPTFGLPAVWVDLSNREEAMFRGYTVVDPPT 512

Query: 496 VVATHLNQILQKHCHELIGHEEVQQLLQVLAKASPKLAEELVPGVISLSGLLKVLQALLS 555
           V+ TH+ ++++ H  EL+ + E Q+LL  L K   KL  +++P  IS SG+ +VLQ LL+
Sbjct: 513 VITTHITEVVKDHMAELLSYAETQKLLDDLDKEQQKLIADMIPTQISTSGVQRVLQNLLA 572

Query: 556 EQVPVRDIRSIAEAIANNAGKSQDTAALVAAVRVGLCRAIVQSIVGVESELPVITLEPRL 615
           E+V +RD+ +I E +A   G +++   +   VR  + R +  + V  +  +P++TL P+ 
Sbjct: 573 ERVSIRDLPTILEGVAEACGATRNIMMITEHVRTRIARQLSDANVNEDGIVPLVTLSPQW 632

Query: 616 EQILLNSLQRAGQGQEDGVLLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVAGPIRAMLS 675
           E     +L   GQG++  + + PS  ++    + +  +R  MQG+  +LL +  IR  + 
Sbjct: 633 ETAFAEAL--IGQGEDRQLSMAPSKLQEFIVGVRQTFERFAMQGESPVLLTSPMIRPYVR 690

Query: 676 RFGRLAVPNLHVLAYQEIPDNKQVTIVATV 705
                  P   V++  EI    ++  +  +
Sbjct: 691 SIIERFRPMTVVMSQNEIHPKAKIKTLGQI 720