Pairwise Alignments

Query, 277 a.a., flagellar synthesis regulator, putative ATPase from Pseudomonas putida KT2440

Subject, 269 a.a., septum site-determining protein MinD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 16/223 (7%)

Query: 8   QVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPKRTLAD-- 65
           Q+I VT GKGGVGKT  S  ++  LA  G + +++D D+GL N+D+++G   +R + D  
Sbjct: 3   QIIVVTSGKGGVGKTTSSAAIATGLAIQGHKTVVIDFDIGLRNLDLIMG-CERRVVYDFV 61

Query: 66  -VIEGRCELRDVMLQGPGGVRI-VPAASGTQSMVHLAPAQHAGLIQAFSEIGDNLDVLVI 123
            VI G   L   +++     ++ V  AS T+    L      G+ +   ++    + ++ 
Sbjct: 62  NVINGEANLNQALIKDKRCEKLYVLPASQTRDKDALT---KEGVGRVLDDLAKEFEFIIC 118

Query: 124 DTAAGIGDSVVSFVRAAQEVLLVVCDEPTSITDAYALIKLLNRDYGMNRFRV------LA 177
           D+ AGI    +  +  A   ++    E +S+ D+  ++ +L          +      L 
Sbjct: 119 DSPAGIEQGAMMALYFADIAIVTTNPEVSSVRDSDRILGMLQSKSRRAELSLEPIKEYLL 178

Query: 178 NMAQSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDECVRKA 220
               SP   ++   ++  V D    +A+  +G +P  + V KA
Sbjct: 179 LTRYSPSRVKS--GEMLSVDDVKEILAIDLLGVIPESQSVLKA 219