Pairwise Alignments

Query, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

Subject, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  357 bits (915), Expect = e-102
 Identities = 249/756 (32%), Positives = 389/756 (51%), Gaps = 69/756 (9%)

Query: 7   EEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELVEC 66
           E++ + F VE  E LE L  +L++L+    D ++LN IFR  H++KGGAG   L+E+ E 
Sbjct: 6   EQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEISEF 65

Query: 67  CHIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPALLAA--LS 124
            H  E   D++R  ++++ A+ +D +L++ D + +M     +   +  A    + A   +
Sbjct: 66  THAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAELQA 125

Query: 125 RLAEPGAAEAVAAPVPAPV--------ADVVAAAPAEAEEQHQDITDSE--FEQLLDSLD 174
            LA+ GA   ++   P           AD +A   A A+         E  F    D L 
Sbjct: 126 LLADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQGWRIRFVPHETLFYSGNDPLR 185

Query: 175 AIKAQAAADEQMQGETVSGAGDEITDAEFESLLDQLHGKGQFNAEVAAPPVAVSSEVVSD 234
            ++       + Q E    A  E+  AE +  L  L    +   +V+   V    + V D
Sbjct: 186 ILRELRELGSEYQIELDHQALPEL--AEIDPELCYLSWTIRLTGDVSENDVRELFDWVED 243

Query: 235 EITDAEFESLLDQLHGKGTFQAGALPAAQAPAPAAPDNSAASDEISEHEFEALLDQLHGK 294
           E  D     +L         +A A    +  APAA   +  S+  ++ E  A++      
Sbjct: 244 E-CDLHIAPILSD-------EASAHVEDEQAAPAA---TLQSNPQTQVEPVAIV------ 286

Query: 295 GKFGGDVAAVEAPAAVQAQAPAAAKAESQPVAKPAAAPAPSPASKPAAAPRAPAPAAEKH 354
                D+ AVE P A               VA   A P  S  +KPA             
Sbjct: 287 -----DLPAVEPPVAT--------------VAPVIANPKESATNKPA------------- 314

Query: 355 AASEAETTVRVDTARLDEIMNMVGELVLVRNRLVRLGLNSGDEAMSKAVSNLDVV---TA 411
               + +++RVD  ++D ++N+VGELV+ ++ L  LG +   + + K  + L  +   + 
Sbjct: 315 KTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLDKLKAGLAQLLQNSK 374

Query: 412 DLQTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLV 471
           DLQ  V+  RM P+   F RFPRLVRDL  +L K+++L++ GE+T+LDK ++E + DPLV
Sbjct: 375 DLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTVLERIVDPLV 434

Query: 472 HLVRNAVDHGIEMPDEREASGKARTGRVVLSAEQEGDHILLSISDDGKGMDPNILRAKAV 531
           HLVRN +DHG+EMPD R A GK  TG + L A  +G  I++ ISDDG G+D + L  KAV
Sbjct: 435 HLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDCDKLWRKAV 494

Query: 532 EKGLMDKDAAER-LSESDCYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINI 590
           EKG+++       L++    NLIFAPGFST  ++SD+SGRGVGMDVV+  I +L G I +
Sbjct: 495 EKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNIEELGGQIEV 554

Query: 591 FSAKGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLD-LSRTNVVDGQEV 649
            S  G+GS+  I +PLTLAI+   +V + +Q +  PL+ + E   ++  S  +   G E+
Sbjct: 555 DSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASVKHAAGGIEL 614

Query: 650 VIVRDKALPLFYLKRWLVQGQVHEEQHEGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLG 709
             +R++ +P+  L+  L  G+    +      + S G  R+G +VD L+ Q++VVIK L 
Sbjct: 615 YRLREENIPILRLQDELAMGRSGSLEKRLICFVESAG-HRVGLLVDDLLDQQQVVIKSLE 673

Query: 710 KMLQGTPGMSGATITGDGRIALILDVPSMLKRYAAR 745
                  G+SGATI GDG ++LILD+P ++  +  R
Sbjct: 674 SNYAKVAGISGATILGDGSVSLILDIPGLIAHFMKR 709