Pairwise Alignments

Query, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  828 bits (2139), Expect = 0.0
 Identities = 467/794 (58%), Positives = 570/794 (71%), Gaps = 63/794 (7%)

Query: 1   MSFGADEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQL 60
           MS+  DE+ILQDFLVEAGEILE LSEQLVELE+ P+D DLLNAIFRGFHTVKGGAGFL L
Sbjct: 1   MSYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLAL 60

Query: 61  NELVECCHIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPALL 120
           +ELVE CH AENVFD+LR G+R V   LMD +L+ALDTVN  F  V+ER  + PA P LL
Sbjct: 61  SELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELL 120

Query: 121 AALSRLAEPGAA---EAVAAPVPAPVADVVAAAPAEAEEQHQDITDSEFEQLLDSLDAIK 177
             L RL++P +    EA  A    P  ++V       EE  +++ +   E+ + +++   
Sbjct: 121 DELHRLSKPASEDEDEAAEAHFDEPEEELV-------EEIIEEVVEDVVEEAVPNVETEV 173

Query: 178 AQAAADEQMQGETVSGAGDEITDAEFESLLDQLHGKG--------QFNAEVAAPPVAVSS 229
             +A+     G    G+ D+I + EFE LLD+LHGKG        Q  A   A   +V++
Sbjct: 174 TASASS----GVIDKGSIDDINEDEFEKLLDELHGKGKAPGAQSPQAPASAPAKAASVTN 229

Query: 230 EVVSDEITDAEFESLLDQLHGKGTFQA--GALPAA----------QAPAPAAPDNSAASD 277
             ++ +ITD EFE LLDQLHGKG   +   A PAA          + P PAA  ++   D
Sbjct: 230 SDLNGDITDDEFEKLLDQLHGKGKGPSIETAAPAAPVTPSTPKATETPKPAAAKSAPGGD 289

Query: 278 EI-SEHEFEALLDQLHGKGKFGGDVAAVE------APAAVQAQAPAAAKAESQPVAKPAA 330
           ++ ++ EFE LLD+LHG GK G  V  +E      A + V + A A+A+A S P  KPAA
Sbjct: 290 DLMTDEEFEKLLDELHGSGK-GPSVEELEMATRPVASSPVSSDAKASAEA-SAPSTKPAA 347

Query: 331 APAPSPAS-KPAAAP----RAPAPAAEKHA-------------ASEAETTVRVDTARLDE 372
            P   PA+ KPA A     +APAPAA K +              ++ E+TVRVDT+ LD 
Sbjct: 348 KPVAKPAAAKPAVAKEEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDT 407

Query: 373 IMNMVGELVLVRNRLVRLGLNSGDEAMSKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRF 432
           IMNMVGELVLVRNRL+ LGLNS DE MSKAV+NLDVVTADLQ AVMKTRMQPIKKVFGRF
Sbjct: 408 IMNMVGELVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRF 467

Query: 433 PRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIEMPDEREASG 492
           PR+VRDLAR L KEI+LEL GEETDLDKNLVEALADPL+HLVRN+VDHGIEMPDER  +G
Sbjct: 468 PRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNG 527

Query: 493 KARTGRVVLSAEQEGDHILLSISDDGKGMDPNILRAKAVEKGLMDKDAAERLSESDCYNL 552
           K+RTG+V+LSA QEGDHI L+I DDG GMDP+ LR  AV++G+MD+DAA RL+  +C+NL
Sbjct: 528 KSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNL 587

Query: 553 IFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIFSAKGQGSKIVIKVPLTLAIMP 612
           IF PGFS+K +I+D+SGRGVGMDVVKT I+ LNGSI+I S  G+G+KI IKVPLTLAI+P
Sbjct: 588 IFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILP 647

Query: 613 TLMVMLGNQAFAFPLVNVNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLV--QGQ 670
           TLMV +    FA PL +VNEIFHLDL RTNVVDGQ  +IVR+K++PLFYL+ WL   +G+
Sbjct: 648 TLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGK 707

Query: 671 VHEEQHEGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIA 730
           V   Q  GHVVI+ +G+QR+G VVD L+GQEEVVIKPL K+LQGTPGMSGATIT DG IA
Sbjct: 708 VQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIA 767

Query: 731 LILDVPSMLKRYAA 744
           LILDVP +LK+YAA
Sbjct: 768 LILDVPDLLKQYAA 781