Pairwise Alignments

Query, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

Subject, 928 a.a., CheA signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score =  194 bits (492), Expect = 2e-53
 Identities = 192/785 (24%), Positives = 330/785 (42%), Gaps = 63/785 (8%)

Query: 1   MSFGADEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQL 60
           MS  +D  +   FL E  E L+ L++ + ++E+   DA       R  H++KGGA  L+ 
Sbjct: 1   MSSTSDNVLRSLFLRETRENLQLLTQMIGQMEAGLPDAKTFADASRAAHSLKGGAALLKF 60

Query: 61  NELVECCHIAENVFDVLRKGER---RVDAELMDVVLEALDTVNSMF-GQVRERAEVTPAT 116
               +     E    +L + E     V   L       L T        V E+A V    
Sbjct: 61  ETFRQLAAGLETCLSLLSEAELPDYEVSLPLFQRAAALLITATDRIEAGVEEQAVVPEEG 120

Query: 117 PALLAALSRLAEPGAAEAVAAPVPAPVADVVAAAPAEAEEQHQDITDSEFEQLL----DS 172
             L+  L  L E   A     P  + V   +           +D+   +FE +L      
Sbjct: 121 NPLIEQLQVLQEMLQAAVQVPPDQSAVTSTL-----------EDLLTQDFETVLLPPTPD 169

Query: 173 LDAIKAQAAADEQMQGETVSGAGDE-----ITDAEFESLLDQLHGKGQFNAEVAAPPVAV 227
           L+    Q   D +     ++G G +     + D  F+ L D +    + +  V    VA 
Sbjct: 170 LEQTLDQLLGDLEETPSPIAGQGSDGDRPALEDLNFD-LEDWIEASEEESETVEIDIVAQ 228

Query: 228 --SSEVVSDEITDAEFESLL-----DQLHGKGTFQAGALPAAQAPAPAAP---DNSAASD 277
             + E    ++T    E  L     D +       A  LP A    P A     ++  + 
Sbjct: 229 VKALEAAIADLTQHPHEQPLSLGIKDDILSAVIQAAPRLPVALTLEPVAKARTQDNGKTP 288

Query: 278 EISEHEFEALLDQLHGKGKFGGDVAAVEAPAAVQAQAPAAAKAESQPVA---------KP 328
            + E      + QL       G++  V        Q+      E+  +          + 
Sbjct: 289 VVFEQTLRVPVRQLDNLSNLVGEIV-VSRNTLESDQSHLRETLENLMLQVHQLGDLGERM 347

Query: 329 AAAPAPSPASKPAAAPRAPAPAAEKHAASEAET--TVRVDTARLDEIMNMVGELVLVRNR 386
                 S      AA R    ++    ++ A T  T + D   LD           +   
Sbjct: 348 RELYERSLLETALAARRQLVGSSTAAGSAGASTFPTEQFDDLELDRFSGFHSISQEMMEL 407

Query: 387 LVRLGLNSGD------EAMSKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDLA 440
           LVRL   + D      E   +   N   +T  LQ+ + +TRM P   +  + PR VR+++
Sbjct: 408 LVRLREAASDIDFMVNEPFDQLTRNFQQITLQLQSELNQTRMVPFSDLTDQLPRAVREIS 467

Query: 441 RQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIEMPDEREASGKARTGRVV 500
           R+  K   LE+ G++  +DK +++ L  P+ HL+ NA+ HGIE  + R+   K+  G +V
Sbjct: 468 RRCGKGARLEIEGKDILIDKMILQKLQAPMTHLINNALSHGIETAEIRQYRNKSAEGTLV 527

Query: 501 LSAEQEGDHILLSISDDGKGMDPNILRAKAVEKGLMDKDAAERLSESDCYNLIFAPGFST 560
           + A  +G+  L++++DDG G+D   ++ KA+ +GL+  + A  +   + Y L+F PGFST
Sbjct: 528 VRASLQGNRTLITVTDDGAGIDAEQVKLKALARGLITPEEAAGMRVREIYELLFRPGFST 587

Query: 561 KTEISDVSGRGVGMDVVKTKISQLNGSINIFSAKGQGSKIVIKVPLTLAIMPTLMVMLGN 620
           + +  +++GRGVG+DVV+  + ++ G I + S  G+G+    ++PLTL+I   L  +   
Sbjct: 588 RDQADELAGRGVGLDVVRRALHEIQGEIVVDSELGKGTTFTFRLPLTLSITKALTCLHER 647

Query: 621 QAFAFPLVNVNEIFHLDLSRTNV-VDGQEVVIVRDKALPLFYLKR----WLVQGQVHEEQ 675
              AFP+ +V E+  +   R  +   GQ  +   + +LP+F L       L  G+     
Sbjct: 648 ARLAFPMDSVEEMLDIPQQRLAMDPQGQLRLDWHNLSLPVFPLSSLLDFHLPFGRSRYYN 707

Query: 676 HEG-----HVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIA 730
             G      +V+L    + +    DQ+ G+ E+VIK +   +    G+ G T+  DG++ 
Sbjct: 708 SLGDDGVVSIVVLRNDNEYLAVQTDQIEGEREIVIKQIEGPIAKPLGILGITVRSDGQVM 767

Query: 731 LILDV 735
            I+DV
Sbjct: 768 PIVDV 772