Pairwise Alignments

Query, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

Subject, 952 a.a., CheA signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score =  212 bits (540), Expect = 6e-59
 Identities = 118/352 (33%), Positives = 198/352 (56%), Gaps = 9/352 (2%)

Query: 397 EAMSKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEET 456
           E   +   +L      +Q  + + RM+P   +  R+PR++R L ++  K++ L + GE T
Sbjct: 452 EETEQTEQSLRRTAKQMQGRLTQVRMRPFADLVNRYPRMIRQLGQEYGKDVRLIINGENT 511

Query: 457 DLDKNLVEALADPLVHLVRNAVDHGIEMPDEREASGKARTGRVVLSAEQEGDHILLSISD 516
            +D+ ++E LADPL+HLVRNA DHG+E P  R++  K+ T  + +SA   G+  +++I D
Sbjct: 512 LVDRAILELLADPLLHLVRNAFDHGVESPQLRQSRDKSPTATIEVSAAYRGNQTVITIRD 571

Query: 517 DGKGMDPNILRAKAVEKGLMDKDAAERLSESDCYNLIFAPGFSTKTEISDVSGRGVGMDV 576
           DG G+D   +R +A   GL D+ + E  S+ +  +LIF PGF+T  +++++SGRGVGMDV
Sbjct: 572 DGCGVDLQKIRQRAQRMGL-DQSSLEAASDRELLDLIFEPGFTTAEQVTELSGRGVGMDV 630

Query: 577 VKTKISQLNGSINIFSAKGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHL 636
           V+T + Q+ G I I +   QG+   I VP +L++   L++ + N   A P   + EI  L
Sbjct: 631 VRTNLQQIRGDIQIETKPNQGTTFTITVPFSLSVARVLLIEVSNILVAIPTDVIEEIIEL 690

Query: 637 DLSRTNVVDGQEVVIVRDKALPLFYLKRWL--------VQGQVHEEQHEGHVVILSVGTQ 688
           + S      GQ V+ + +  +PL  L +W         +        ++  V++++ G  
Sbjct: 691 NPSWILNSAGQTVLNLDEILVPLLQLDQWFQFSRPCPPISLDGVPTINQPTVLLVNQGNS 750

Query: 689 RIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSMLK 740
            +G  VD+  G++EV I+ +   +   PG S  TI GDGRI  ++D  S+L+
Sbjct: 751 FVGIQVDRYWGEQEVTIRQVNSTIPLPPGFSSCTILGDGRIVPLVDTFSLLQ 802



 Score = 59.7 bits (143), Expect = 7e-13
 Identities = 83/384 (21%), Positives = 146/384 (38%), Gaps = 45/384 (11%)

Query: 13  FLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELVECCHIAEN 72
           FL EA E L  + ++LV+L    D    ++ I R  H++KGGA  +  N L E  H  E+
Sbjct: 12  FLEEAEEYLGTIEKELVDLSQASDRRSQVDLILRAAHSIKGGAAMMGFNTLSELAHQLED 71

Query: 73  VFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPALLAALSRLAEPGAA 132
            F V+R G +  D  L   +L+ +D ++ +    R+  + +P         S++    A 
Sbjct: 72  FFKVMRSG-KNFDQSLERQLLQGVDRLHQVLQVNRQGTDPSPQW-----LESQVQPLFAV 125

Query: 133 EAVAAPVPAPVADVVAAAPAEAEEQHQDITDSEFEQLLDSLDAIKAQAAADEQMQGETVS 192
                  P P AD+   +    ++    + +SE E  L  L+++         ++     
Sbjct: 126 LREQFGDPQPDADLAMLSEEAGDDMRSLLFESEVEGCLQRLESVLQTPEHPCLLE----- 180

Query: 193 GAGDEITDAEFESLLDQLHGKGQFNAEVAAPPVAVS-SEVVSDEITDAEFES---LLDQL 248
                    EF  +  +L G GQ            S +E++  + TD    +   L D  
Sbjct: 181 ---------EFAIVAQELAGLGQMLELSQFSQFCTSIAELLEQQPTDLRATATKILKDLR 231

Query: 249 HGKG---TFQAGALPAAQAPAPAAPDNSA--ASDEISEHEFEALLDQLHGKGKFGGDVAA 303
           H +    T Q  ALP+       +P+     A+  ++E  F    + +H        + A
Sbjct: 232 HCQALVLTQQINALPSQFVAQDQSPEGITLEANSGLAE-TFPQTKEVIH-----QNQITA 285

Query: 304 VEAPAAVQAQAPAAAKAESQPVAKPAAAPAPSPASKPAAAPRAPAPAAEKHAASEAETTV 363
                 +Q+    A   +     +        P          P  A +  +      TV
Sbjct: 286 TRNSENIQSSLTVAEARQLDFTPETITTQTLHP----------PINATDLTSEINQARTV 335

Query: 364 RVDTARLDEIMNMVGELVLVRNRL 387
           RV   +L+++  + GEL + RN L
Sbjct: 336 RVGIQQLEDLSELFGELNIERNGL 359