Pairwise Alignments

Query, 159 a.a., Chemotaxis protein CheW from Pseudomonas putida KT2440

Subject, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score = 97.1 bits (240), Expect = 4e-25
 Identities = 51/144 (35%), Positives = 93/144 (64%), Gaps = 2/144 (1%)

Query: 14  LQWVTFRLDNESYGINVMQVQEVLRYTE-IAPVPGAPSYVLGIINLRGNVVTVIDTRQRF 72
           +Q V F+LD E +GI++  VQE++R  E I+ VP    ++ G+INLRGNV+ ++D R+RF
Sbjct: 369 MQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRF 428

Query: 73  GLMPTEVTDNTRIVIIEADKQVVGILVDSVAEVVYLRQSEIETAPNVGNEESAKFIQGVC 132
            L      +  RI+++  +K   G +VDSV+EV+ + +S++E AP V +EE A+ ++ + 
Sbjct: 429 HLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAP-VLSEEQAQLMRQMV 487

Query: 133 NKNGELLILVELDKMMTEEEWSEL 156
           N +  ++ ++  D++++  E  +L
Sbjct: 488 NLSPRMIGVLSADQLISNTEMYKL 511



 Score = 73.9 bits (180), Expect = 4e-18
 Identities = 38/148 (25%), Positives = 74/148 (50%)

Query: 10  EDPILQWVTFRLDNESYGINVMQVQEVLRYTEIAPVPGAPSYVLGIINLRGNVVTVIDTR 69
           E+ + Q+V F L +E + +++ +V+E++R      VP  PSY++G+ NLRG ++ V+  R
Sbjct: 14  EENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLR 73

Query: 70  QRFGLMPTEVTDNTRIVIIEADKQVVGILVDSVAEVVYLRQSEIETAPNVGNEESAKFIQ 129
               +  T  T+ TR+++I   K  +G  VD V  V       I+     G +     I 
Sbjct: 74  TLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLIT 133

Query: 130 GVCNKNGELLILVELDKMMTEEEWSELE 157
              + + +++ ++   +++      ELE
Sbjct: 134 NTIHSDNQIIQVLNCHRLLDNSVEEELE 161



 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 7/131 (5%)

Query: 10  EDPILQWVTFRLDNESYGINVMQVQEVLRYTEI-APVPGAPSYVLGIINLRGNVVTVIDT 68
           ++ + Q V   +D + Y   +   QE++R  EI   VP   S +LG+INLRG  + ++  
Sbjct: 187 DEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSL 246

Query: 69  RQRFGLMPTEVTDNTRIVII-----EADKQVVGILVDSVAEVVYLRQSEIETAPNVGNE- 122
           R  FGL     +D+ R++++     E ++  VG++VD+V EV+ L    +++ P + ++ 
Sbjct: 247 RTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKM 306

Query: 123 ESAKFIQGVCN 133
             A  I  +CN
Sbjct: 307 GQANDISAICN 317