Pairwise Alignments

Query, 397 a.a., putative D-amino acid dehydrogenase 2 small subunit from Pseudomonas putida KT2440

Subject, 413 a.a., D-amino acid dehydrogenase from Sinorhizobium meliloti 1021

 Score =  114 bits (285), Expect = 5e-30
 Identities = 118/407 (28%), Positives = 176/407 (43%), Gaps = 31/407 (7%)

Query: 5   VTVIGGGVVGLATAYALVREGWSVDLIEARDSLASATSFANGGQLSYRYVAPLADAGVPW 64
           V VIG GVVGL  A A V  G SV +++ R+  A+  S  N G  ++  + PLA  G+  
Sbjct: 6   VIVIGAGVVGLTAAIAAVASGLSVTVLD-REGPAAGASAGNAGAFAFTDILPLASPGILK 64

Query: 65  QALGWLLRGESPLRL----RLRMDPAQWRWLLAFTLACRRSVNRRNAGQLLELALCSQAV 120
           +A  WLL    PL +     L++ P    W+  F  AC+      +      L   S+A 
Sbjct: 65  KAPKWLLDPLGPLTVPPAYALKIAP----WMFRFWRACQPGRVAHSTAAQTALMDLSKAE 120

Query: 121 LAQWREDHNLGDFG----WRRNGKLVAFRSERAF----AQGREQLTDPASQQVLAAAELR 172
           L  +     LG  G     R+ G L  +  E  F    A  + +       + L AA + 
Sbjct: 121 LEPF-----LGATGTASMLRKEGNLQVYEGEAEFKASLAGWKARADHGIEFRHLDAAGIA 175

Query: 173 GLEPALDGAPFVGGVFTAG-EEVGDCHVFCLRLEALLRASGQCRFLLGRPVTQLVQRQGQ 231
            ++P L  A F    FT G   + D  ++ L L    R  G    +    VT L    G 
Sbjct: 176 EIQPGL-AARFTHATFTPGWYSIADPKLYTLALADHFRTIG--GVIERAEVTALKPVDGG 232

Query: 232 VVALQLGDQQLDVEQLVLCAGHRGPGLALP-GVQIPVYPLKGYSLTAPISAGHLPPEVSL 290
           V  L    ++    Q+VL AG     +A   G  IP+   +GY+ T P  A  L  +++ 
Sbjct: 233 VEVLSADGRRRRAAQVVLSAGAFSHRVARTLGESIPLETERGYNTTLPADAFDLRTQITF 292

Query: 291 TDYERKIVYARLGQQLRVAAMVDIVGFDESVDMRRLQSMRRLALETLPRAADYGQAVEWA 350
             +    V  RL   +RV   V++ G D   + RR ++M + A   LP     G  V+W 
Sbjct: 293 GGH--GFVVTRLSTGIRVGGAVELGGLDLPPNFRRSEAMLKKAQAFLPGLKPEG-GVQWM 349

Query: 351 GMRPATPTGVPIIG-GTVYRNLWLNLGHGALGFTLACGSAQRLARMM 396
           G RP+ P  +P IG       +    GHG LG T + G+A+ +A ++
Sbjct: 350 GFRPSLPDSLPAIGRARATPRVIFAFGHGHLGLTQSAGTARIVADLL 396



 Score = 26.6 bits (57), Expect = 0.001
 Identities = 15/35 (42%), Positives = 17/35 (48%)

Query: 149 AFAQGREQLTDPASQQVLAAAELRGLEPALDGAPF 183
           AF  G   LT  A    + A  L G  PA+D APF
Sbjct: 374 AFGHGHLGLTQSAGTARIVADLLTGRTPAIDIAPF 408