Pairwise Alignments

Query, 304 a.a., conserved inner membrane protein from Pseudomonas putida KT2440

Subject, 311 a.a., DUF808 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  325 bits (833), Expect = 8e-94
 Identities = 178/314 (56%), Positives = 227/314 (72%), Gaps = 17/314 (5%)

Query: 1   MAGSSLLVLIDDIATLLDDVSLMTKVAAKKTAGVLGDDLALNAQQVTGVRADRELPVVWA 60
           MAG+SLL L+DDIAT+LDDV+LM+K+AAKKTAGVLGDDLALNAQQV+GV A+RE+PVVWA
Sbjct: 1   MAGASLLTLLDDIATVLDDVALMSKMAAKKTAGVLGDDLALNAQQVSGVAAEREIPVVWA 60

Query: 61  VAKGSFVNKAILVPAALLISAFIPWAVTPLLMLGGAFLCFEGFEKLAHKFLHSKEEDEAQ 120
           VAKGSF NK ILVPAAL+IS+  PW + PLL++GG FLCFEG EK+  K+LH + +  A+
Sbjct: 61  VAKGSFRNKLILVPAALIISSIAPWLIMPLLLIGGLFLCFEGAEKILEKWLHPEPKQNAE 120

Query: 121 HEARK------EAVADASVDLVAFEKAKIKGAVRTDFILSAEIIAITLGIVADSPLTQQI 174
             A        E  + A+  L  +EK KI GA+RTDFILSAEII I LG V    +  QI
Sbjct: 121 QRAAAIVNEGLETESLATESLAEYEKRKIGGAIRTDFILSAEIIVIALGTVQGHSMLTQI 180

Query: 175 IVLSGIAVVMTIGVYGLVGGIVKLDDLGLWMAR--KTSRLIQAVGNGILRAAPYMMKSLS 232
           +V+S IAV+MTIGVYGLV GIVKLDDLG ++ R  K   L  ++G  ++R AP +MK L+
Sbjct: 181 LVVSLIAVIMTIGVYGLVAGIVKLDDLGFYLQRQSKGQGLKASLGGVLVRFAPKLMKGLT 240

Query: 233 VIGTAAMFLVGGGILVHGIEPLHHAIEAFSE-----GRGGALTSALLNGGVGVLAGAVVL 287
           V+GTAAMFLVGGGI+VH +  +HH +E   +        G L   L+NG +GV+AG++++
Sbjct: 241 VVGTAAMFLVGGGIVVHNVPAVHHILEPMLDVVHAWPVVGTLMPTLMNGVIGVVAGSLLV 300

Query: 288 AVVSVAGKLWRAVR 301
           AV+ V    W  VR
Sbjct: 301 AVMEV----WHKVR 310