Pairwise Alignments

Query, 304 a.a., conserved inner membrane protein from Pseudomonas putida KT2440

Subject, 306 a.a., Probable conserved integral membrane protein from Mycobacterium tuberculosis H37Rv

 Score =  188 bits (477), Expect = 2e-52
 Identities = 119/305 (39%), Positives = 169/305 (55%), Gaps = 36/305 (11%)

Query: 6   LLVLIDDIATL-------LDDVSLMTKVAAKKTAGVLGDDLALNAQQVTGVRADRELPVV 58
           L  L+D +A L       +DD+      A  K AGV+ DD A+  Q V  + A+RELP++
Sbjct: 5   LFGLLDHVAVLARLAAASIDDIGAAAGRATAKAAGVVIDDTAVTPQYVHRITAERELPII 64

Query: 59  WAVAKGSFVNKAILV-PAALLISAFIPWAVTPLLMLGGAFLCFEGFEKLAHKFLHSKEED 117
             +A GS  NK +L+ P ALL+S  +PW +TPLLMLG  +LC+EG EK+    +  +  D
Sbjct: 65  KRIAIGSVRNKLLLILPGALLLSQLVPWLLTPLLMLGATYLCYEGAEKVCG-VIGGRGHD 123

Query: 118 EAQHEARKEAVADASVDLVAFEKAKIKGAVRTDFILSAEIIAITLGIVADSPLTQQIIVL 177
            A   A +E VA               GA+RTDFILSAEI+ I L  VAD P   ++IVL
Sbjct: 124 AAPQVAERELVA---------------GAIRTDFILSAEIMVIALNEVADQPFVPRLIVL 168

Query: 178 SGIAVVMTIGVYGLVGGIVKLDDLGLWMARKTSRLIQAVGNGILRAAPYMMKSLSVIGTA 237
             +A+V+T  VYG+V  IV++DD+GL + +  SR  Q +G G++   P ++ +LS +G  
Sbjct: 169 VIVALVITAAVYGVVAVIVQMDDVGLRLTQTASRFGQRIGGGLVAGMPKLLSALSAVGMG 228

Query: 238 AMFLVGGGILVHGIEPL---------HHAIEAFSEGRGGALT---SALLNGGVGVLAGAV 285
           AM  VGG I++ G + L         HH  +      GGALT   S       G++ G V
Sbjct: 229 AMLWVGGHIVLVGSDHLGWHAPYRLVHHLDDHLVGSAGGALTWLVSTAACAATGLVIGIV 288

Query: 286 VLAVV 290
           V+A+V
Sbjct: 289 VVALV 293