Pairwise Alignments

Query, 460 a.a., oxygen-independent coproporphyrinogen III dehydrogenase from Pseudomonas putida KT2440

Subject, 385 a.a., oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 6/245 (2%)

Query: 53  PLSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQLVACHLDPKQRVEQLHF 112
           PLSLY+H+P+C   C YC  N            Y+  L  +++    HL   +++  +  
Sbjct: 13  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQQAYVDALLADLRQ-DLHLVQGRKLHTIFI 71

Query: 113 GGGTPTFLSHVELRQLMATLRQHFHLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVS 172
           GGGTP+     ++++++            D  +  +E +P   +       R  G  R+S
Sbjct: 72  GGGTPSLFDANQIKRILDDANALIPF--SDGIEITMEANPGTLEHDDFSAYRAAGVTRLS 129

Query: 173 LGVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSVNLDLIYGLPKQTPEGFARTVEE 232
           +GVQ         + R+    + +T  + AR   + S NLDL++GLP Q+ E     ++ 
Sbjct: 130 IGVQSFSKDKLNLLGRIHDQNEAQTAAQKARQADYLSFNLDLMHGLPNQSFEEAMADIDT 189

Query: 233 VIRLQPDRLSVFNYAHLPERFMPQRRIDSNDLPSAAAKLEMLHATIDQLTAAGYRYIGMD 292
              L P  LS +     P      +      LP      ++      +L A GY    + 
Sbjct: 190 AASLNPPHLSWYQLTIEPNTLFHSK---PPQLPDDEDLWQIYEQGQQKLAALGYEQYEIS 246

Query: 293 HFALP 297
            +A P
Sbjct: 247 AYAKP 251