Pairwise Alignments

Query, 325 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 291 a.a., Cytochrome c oxidase cbb3-type, subunit III (NCBI) from Rhodospirillum rubrum S1H

 Score =  149 bits (376), Expect = 8e-41
 Identities = 97/297 (32%), Positives = 143/297 (48%), Gaps = 44/297 (14%)

Query: 39  TVGHAFDGIEEYDNPLPQWWFWLFVGTIVFALGYLVLYPGLGNWKGVLPGYSYLDNDKQT 98
           T GH +DGI E + PLP WW W+F  TIV+AL Y+V+YP +       PG          
Sbjct: 15  TTGHEWDGITELNTPLPAWWVWVFYATIVWALAYVVVYPAIPLGASATPGLF-------- 66

Query: 99  EFSNGQPGWTGVHEWEKEMAKADARF-GPIFAKFAAMPIEE-VAKDP---QALKMGARLF 153
                  GW    E +K+M +A   F     A+  +M ++  +A DP    A + G  +F
Sbjct: 67  -------GWHSRTELQKDMNQAYQAFHADKVARIESMDVDAIIADDPLRQYATRAGEVIF 119

Query: 154 ASNCSVCHGSDAKGAFGFPNLTDNDWRWGGEPETIKTTIMAG----------RHGVMPAW 203
             NC+ CH S   G +G+P L D++W WGG  + I TT+  G          R   MP++
Sbjct: 120 KENCAPCHQSGGAGNYGYPTLADDEWLWGGTADAIYTTVRHGIRDTNTFDDTRFNEMPSF 179

Query: 204 AEVIGDQGVADVAAFVVSKLDGRTLPEGAKADVENGQKIFAANCVACH-----GPEGKGT 258
           AE + ++ +  +A +VV+   G +LP G      +GQ++F  NC  CH     GP   G 
Sbjct: 180 AE-LPEEDLNALADYVVAASAG-SLPAG------HGQQLFEENCAVCHASESSGPVPDGN 231

Query: 259 PAMGAPNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYSL 315
            AMGAP L + Q ++Y      +   +R  +QG MP       +  +     YV+SL
Sbjct: 232 QAMGAPALNN-QIWLYKGDKESILAQLRAPKQGMMPGWANRLKDSDIKSATVYVHSL 287