Pairwise Alignments

Query, 325 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 322 a.a., cytochrome c oxidase, cbb3-type, subunit III (RefSeq) from Shewanella sp. ANA-3

 Score =  281 bits (719), Expect = 2e-80
 Identities = 150/327 (45%), Positives = 211/327 (64%), Gaps = 14/327 (4%)

Query: 1   MTTFWSLYVTVLTLGTIFSLTWLLLSTRKGQREEVTDETVGHAFDGIEEYDNPLPQWWFW 60
           M++FWS++++VL+L  I     LL    K   +    E++GH+FDGIEE +NPLP+WW +
Sbjct: 1   MSSFWSIWISVLSLTVIAGCFLLLRVCSKNTTDVKEGESMGHSFDGIEELNNPLPKWWSY 60

Query: 61  LFVGTIVFALGYLVLYPGLGNWKGVLPGYSY---LDNDKQTEFSNGQPGWTGVHE----- 112
           +F  TIVF L YL L+PGLGN+KG+L   S    +  +K  +  +         E     
Sbjct: 61  MFYITIVFGLVYLALFPGLGNYKGLLNWTSSNQSIGTEKGIKADSAAAIELAAKEGMYVQ 120

Query: 113 WEKEMAKADARFGPIFAKFAAMPIEEVAKDPQALKMGARLFASNCSVCHGSDAKGAFGFP 172
           +++E+  A+ ++GPIFA + A P+EE+ K+ +ALK+G RLF  NC+ CHGSDA+G+ GFP
Sbjct: 121 YDQEVKHANEKYGPIFAAYLATPLEELVKNQEALKVGGRLFLQNCAQCHGSDARGSKGFP 180

Query: 173 NLTDNDWRWGGEPETIKTTIMAGRHGVMPAWAEV-IGDQGVADVAAFVVSKLDGRTLPEG 231
           NLTD+DW +GG+  TIKTTIM GRHG+MP    + I D  +A +A +VV KL GR   E 
Sbjct: 181 NLTDSDWLYGGDLATIKTTIMNGRHGMMPPKGGLPIDDSEIAGLAEYVV-KLSGREHDEK 239

Query: 232 AKADVENGQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRYGRQG 291
             A    GQ  F   C ACHG + KG   MGAPNLT    ++YG S   +++TI++GR G
Sbjct: 240 LAA---QGQGSFMKGCFACHGMDAKGNKLMGAPNLT-DDVWLYGGSRGMIEETIKHGRAG 295

Query: 292 QMPAQEQLQGNDKVHLLAAYVYSLSHQ 318
            MPA + + G +KVH++AAYVYSLS++
Sbjct: 296 VMPAWKDVLGEEKVHVIAAYVYSLSNK 322