Pairwise Alignments

Query, 202 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 250 a.a., cbb3-type cytochrome c oxidase subunit II from Sinorhizobium meliloti 1021

 Score =  204 bits (519), Expect = 1e-57
 Identities = 112/229 (48%), Positives = 135/229 (58%), Gaps = 31/229 (13%)

Query: 3   HEAVEKNIGLLAFFMVIAVSVGGLTQIVPLFFQDVTNKPVEGMKPRTALEVEGRDIYIRE 62
           H  +E+        +++A SVGG+ +I PLF  D T + VE M+  T LE+ GR+IYIRE
Sbjct: 6   HRKLERTAIGFVLAIILAASVGGIVEIAPLFTIDETVEDVEDMRLYTPLELAGRNIYIRE 65

Query: 63  GCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWGSKRTGPDLARVGGRYSDDWHRA 122
           GC  CHSQMIR  R E ERYG +S+A ES +DHP LWGSKRTGPDLARVGG+YSD WH A
Sbjct: 66  GCYACHSQMIRTLRDEVERYGPFSLAVESKYDHPMLWGSKRTGPDLARVGGKYSDFWHVA 125

Query: 123 HLYNPRNVVPESKMPSYPWLVENKLDGKDTAKKMEVLRTLGTPYTDADIA-GARDA---- 177
           HL NPR+VVPES MP+Y WL    L   D    +E  R++G PYTD  I   ARDA    
Sbjct: 126 HLTNPRDVVPESNMPAYAWLARTPLRLDDLGSHLEAQRSVGVPYTDEMIENAARDAFGQA 185

Query: 178 --------------------------VKGKTEMDAIVAYLQGLGTIIKS 200
                                         TEMDA+VAYLQ LG + K+
Sbjct: 186 VPDSEQASGVTERYGDETQVSAFDGVATRVTEMDALVAYLQVLGRLTKA 234