Pairwise Alignments

Query, 480 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 541 a.a., Cytochrome-c oxidase from Synechococcus elongatus PCC 7942

 Score = 83.6 bits (205), Expect = 2e-20
 Identities = 101/444 (22%), Positives = 186/444 (41%), Gaps = 51/444 (11%)

Query: 11  NYKVVR-QFAIMTVVWGILGMGLGVFIASQLVWPQLNLDLPWTSFGRLRPLHTNLVIFAF 69
           ++KV+  Q+ ++T ++ ++G  L   +  +L  P +++ +    + +L  +H  ++IF +
Sbjct: 30  DHKVIGIQYLVLTFIFYLIGGALATAVRLELATPTVDV-VSRDLYNQLFTVHATVMIFLW 88

Query: 70  ---GGCALFGTSYYVVQRTCQTR-LISDSMAAFTFW----GWQAVIVGALITLPM-GYTT 120
               G   FG   Y++      R +    + A  FW        +I   L+  P  G+T+
Sbjct: 89  IVPAGSGAFGN--YLIPLLIGARDMAFPKLNAVAFWLLPPAGILLIASFLVEAPSSGWTS 146

Query: 121 -------TKEYAELEWPLAILLAIVWVTYGLVFFGT-IVKRKTKHIYVGNW-----FYGA 167
                  + +  E+ W L++LL       G + F T I+K +   +    W     F  A
Sbjct: 147 YPPLSLMSGKTGEMIWILSVLLLGTSSILGAINFATTIIKMRRPGL---GWNQMPLFCWA 203

Query: 168 FIVVTAMLHIVNHISLPVSLFKSY---------SAYSGATDAMIQ---WWYGHNAVGFFL 215
            +  + M  +   +     +  S+         +   G    + Q   W+Y H AV   +
Sbjct: 204 MLSTSIMAILSTPVLAGALILLSFDLMVGTNFFNPLGGGNPVVYQHLFWFYSHPAVYIMI 263

Query: 216 TTGFLGMMYYFVPKQAERPIYSYRLSIVHFWAL--ITLYIWAGPHHLHYTALPDWAQSLG 273
              F GM+   +P  A +PI+ Y+       A+  ++L +WA  HH+  +  P W +   
Sbjct: 264 LPVF-GMISEILPVHARKPIFGYQAIAYSSLAITFLSLIVWA--HHMFTSGTPPWLRMFF 320

Query: 274 MVMSIILLAPSWGGMINGMMTLSGAWHKLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTV 333
           M+ ++I+  P+   + + + TL G   KL+    L F V  ++ + +    G M+A   V
Sbjct: 321 MIATMIIAVPTGIKVFSWLATLWGG--KLQLTSALLFSVGFISMFVIGGLSGIMLASVPV 378

Query: 334 NSLSHYTDWTIGHVHAGALGWVAMISIGAVYHMIPKLYGREQMHSIGLINAHFWLATIGT 393
           +   H T + + H H    G         +YH  PK+ GR  + + G    HF L  +G 
Sbjct: 379 DIHVHDTYFVVAHFHYVLFGGSVFGLYAGIYHWFPKMTGR--LLNEGWGKVHFILTLVGF 436

Query: 394 VLYIASMWVNGITQGLMWRAINDD 417
            L    M   G+ QG+  R    D
Sbjct: 437 NLCFLPMHWLGL-QGMPRRVAEYD 459