Pairwise Alignments

Query, 480 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 593 a.a., alternative cytochrome C oxidase polypeptide I transmembrane protein from Sinorhizobium meliloti 1021

 Score = 58.5 bits (140), Expect = 6e-13
 Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 20/221 (9%)

Query: 194 YSGATDAMIQ---WWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWALIT 250
           Y G +  + Q   W++GH  V       F G++   +   A + I+ YR+ +   WA++ 
Sbjct: 265 YGGGSPILFQHLFWFFGHPEVYIVALPAF-GIVSDLISTHARKNIFGYRMMV---WAIVI 320

Query: 251 L-----YIWAGPHHLHYTALPDWAQSLGMVMSIILLAPSWGGMINGMMTL-SGAWHKLRT 304
           +      +WA  HH++ + +  +        ++I+  P+   + N ++TL  G  H   T
Sbjct: 321 IGGLSFIVWA--HHMYVSGMNPYFGFFFATTTLIIAVPTAIKVYNWVLTLWRGNIHL--T 376

Query: 305 DPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAVY 364
            P+L  L   + F       G  +    V+     T + + H H        M+  GA+Y
Sbjct: 377 LPMLFALAFIVTFVN-GGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVIFGAIY 435

Query: 365 HMIPKLYGREQMHSIGLINAHFWLATIGTVLYIASMWVNGI 405
           H  PK+ GR    ++G I  HFW+  IG       M   G+
Sbjct: 436 HWYPKITGRMLNEAMGQI--HFWVTFIGAYAIFFPMHYLGL 474