Pairwise Alignments

Query, 480 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 496 a.a., Cytochrome c oxidase cbb3-type, subunit I (NCBI) from Rhodospirillum rubrum S1H

 Score =  620 bits (1598), Expect = 0.0
 Identities = 288/466 (61%), Positives = 358/466 (76%), Gaps = 7/466 (1%)

Query: 14  VVRQFAIMTVVWGILGMGLGVFIASQLVWPQLNLDLPWTSFGRLRPLHTNLVIFAFGGCA 73
           V+++F I  V+WG++G   G  IA QL +P LN+DL WTSFGRLRPLHT+ V+FAFGG  
Sbjct: 21  VIKKFVIAAVLWGVVGFIAGDVIAWQLAFPSLNMDLEWTSFGRLRPLHTSAVVFAFGGNV 80

Query: 74  LFGTSYYVVQRTCQTRLISDS-MAAFTFWGWQAVIVGALITLPMGYTTTKEYAELEWPLA 132
           L GTS YVVQRT +  L   + +    FWG+Q  IV A +   +G T  KEYAE EW + 
Sbjct: 81  LLGTSLYVVQRTSRASLYGGAALGNIIFWGYQLFIVMAALGYVLGVTQGKEYAEPEWFVD 140

Query: 133 ILLAIVWVTYGLVFFGTIVKRKTKHIYVGNWFYGAFIVVTAMLHIVNHISLPVSLF---- 188
           + L +VWV Y   F GT++KR+  HIYV NWF+ A I+  A+LH+ N++++PV+L     
Sbjct: 141 LFLTVVWVLYLAAFLGTLLKRREPHIYVANWFFLAMIITIALLHLGNNMAIPVALMGGDS 200

Query: 189 --KSYSAYSGATDAMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFW 246
             KSY  YSG  DAM QWWYGHNAVGFFLT GFLG+MYYFVPKQA+RP+YSYRLSIVHFW
Sbjct: 201 WVKSYGFYSGVQDAMTQWWYGHNAVGFFLTAGFLGIMYYFVPKQAQRPVYSYRLSIVHFW 260

Query: 247 ALITLYIWAGPHHLHYTALPDWAQSLGMVMSIILLAPSWGGMINGMMTLSGAWHKLRTDP 306
           ALI LYIWAGPHHLHYTALPDWAQ++GMV S++L  PSWGGMING+MTLSGAW KLRTDP
Sbjct: 261 ALIFLYIWAGPHHLHYTALPDWAQTVGMVFSVMLWMPSWGGMINGLMTLSGAWDKLRTDP 320

Query: 307 ILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAVYHM 366
           +LRFLVVS+ FYGMSTFEGPMM+IK VNSLSHYTDWTIGHVH+GALGWVA +S GA+Y++
Sbjct: 321 VLRFLVVSVGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWVAFVSFGALYYL 380

Query: 367 IPKLYGREQMHSIGLINAHFWLATIGTVLYIASMWVNGITQGLMWRAINDDGTLTYSFVE 426
           +P L+ R  ++S+ L++ HFW+AT+G VLYI SMWV+GI QGLMWRA ++ G L YSF+E
Sbjct: 381 VPALWKRRSLYSLKLVSLHFWIATLGIVLYITSMWVSGIMQGLMWRAYDELGFLQYSFIE 440

Query: 427 ALQASHPGYIVRALGGAFFASGMLLMAYNVFRTVRAANPAQAEEAA 472
           ++ A HP YI+RA GG  F  G ++M YN++RT++      A +AA
Sbjct: 441 SVAAMHPYYIIRATGGVLFVIGSVVMVYNMYRTIKGDIREDAPQAA 486