Pairwise Alignments

Query, 480 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 536 a.a., cytochrome c oxidase subunit 1 from Phaeobacter inhibens DSM 17395

 Score =  613 bits (1580), Expect = e-180
 Identities = 295/476 (61%), Positives = 361/476 (75%), Gaps = 11/476 (2%)

Query: 10  YNYKVVRQFAIMTVVWGILGMGLGVFIASQLVWPQLNLDLPWT----SFGRLRPLHTNLV 65
           Y   VVR   + T  WG++G  +GVFIA QL +P LN +  W     +FGRLRPLHT+ V
Sbjct: 65  YFDSVVRAGVVATAFWGVVGFLVGVFIAFQLAFPVLNFE--WAQGLANFGRLRPLHTSAV 122

Query: 66  IFAFGGCALFGTSYYVVQRTCQTRLISDSMAAFTFWGWQAVIVGALITLPMGYTTTKEYA 125
           IFAFGG AL  TS+YVVQRT   RL   ++A F FWG+Q  IV A      G T +KEYA
Sbjct: 123 IFAFGGNALIATSFYVVQRTSAARLWGGNLAWFVFWGYQLFIVLAATGYLFGSTQSKEYA 182

Query: 126 ELEWPLAILLAIVWVTYGLVFFGTIVKRKTKHIYVGNWFYGAFIVVTAMLHIVNHISLPV 185
           E EW + + L IVWV Y  VF GT++KRK  HIYV NWFY AFIV  AMLH+VN++++PV
Sbjct: 183 EPEWHVDLWLTIVWVAYLAVFLGTVIKRKEPHIYVANWFYLAFIVTVAMLHLVNNMTIPV 242

Query: 186 SLF--KSYSAYSGATDAMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIV 243
           S++  KS   +SG  DAM+QWWYGHNAVGFFLT GFLGMMYYFVPKQAERP++SY+LSI+
Sbjct: 243 SIWGSKSVIMWSGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVFSYKLSII 302

Query: 244 HFWALITLYIWAGPHHLHYTALPDWAQSLGMVMSIILLAPSWGGMINGMMTLSGAWHKLR 303
           HFWALI LYIWAGPHHLHYTALPDWA +LGMV SI+L  PSWGGMING+MTLSGAW KLR
Sbjct: 303 HFWALIFLYIWAGPHHLHYTALPDWASTLGMVFSIVLWMPSWGGMINGLMTLSGAWDKLR 362

Query: 304 TDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAV 363
           TDP++R +V+S+ FYGMSTFEGPMM+I+ VNSLSHYTDWTIGHVH+GALGW  MI+ GA+
Sbjct: 363 TDPVIRMMVISIGFYGMSTFEGPMMSIRAVNSLSHYTDWTIGHVHSGALGWNGMITFGAL 422

Query: 364 YHMIPKLYGREQMHSIGLINAHFWLATIGTVLYIASMWVNGITQGLMWRAINDDGTLTYS 423
           Y ++P L+ RE+++S+ L++ HFWLATIG +LY ASMWV GI +GLMWR ++ +G L  S
Sbjct: 423 YFLVPVLWKRERLYSLSLVSWHFWLATIGIILYAASMWVTGIMEGLMWREVDANGFLVNS 482

Query: 424 FVEALQASHPGYIVRALGGAFFASGMLLMAYNVFRTVRAANPAQAEEAAKIVVVGA 479
           F + + A  P Y+VRALGG  F +G L+M YN++ TVR    A A+EA+  V V A
Sbjct: 483 FADTVAAKFPMYVVRALGGVMFLAGALIMCYNLWMTVRR---APAKEASLTVAVPA 535