Pairwise Alignments

Query, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 210 a.a., Cytochrome c553 from Pseudomonas stutzeri RCH2

 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 46/185 (24%), Positives = 65/185 (35%), Gaps = 35/185 (18%)

Query: 143 CSVCHGSDAKG-AFGFPNLTDNDWRW-------------GGDPETIKTSIMSGRHGVMPA 188
           C  CHG+D    A  FP L     R+              G PE +   ++      M  
Sbjct: 34  CGACHGADGNSPAPNFPKLAGQGERYLLKQLQDIKAGSTPGAPEGVGRKVLE-----MTG 88

Query: 189 WAEVIGDQGVADVAAFVVSKLD--GRTLPEGAKADVENGQKIFAAN--------CVACHG 238
             + + DQ + D+AA+  S+    G T P  AK     G+K+F           C  CH 
Sbjct: 89  MLDPLSDQDLQDIAAYFSSQKGSVGYTDPALAK----QGEKLFRGGKLDQGMPACTGCHA 144

Query: 239 PEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRY--GRQGQMPAQAEIQGNDKVHLLAA 296
           P G G    G P L    A          ++  R   G    M   A    N  +  L++
Sbjct: 145 PNGVGNDLAGFPKLGGQHAAYTAKQLTDFREGNRTNDGDSMIMRGVAAKLSNKDIEALSS 204

Query: 297 YVYSL 301
           Y+  L
Sbjct: 205 YIQGL 209



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 218 AKADVENGQKIFAANCVACHGPEGKGTPAMGAPNL 252
           A  D E GQ   A  C ACHG +G  +PA   P L
Sbjct: 20  AAGDAEAGQGKVAM-CGACHGADG-NSPAPNFPKL 52