Pairwise Alignments

Query, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

 Score =  272 bits (696), Expect = 7e-78
 Identities = 147/332 (44%), Positives = 203/332 (61%), Gaps = 41/332 (12%)

Query: 1   MTTFWSTYISVLTIGSLIGLTWLLLATRKGQSNNTTDETMGHSFDGIEEYDNPLPKWWFW 60
           MTTFWS +I V+T+G+L+G   LL+   K +        MGH +DGI E +NPLPKWW +
Sbjct: 1   MTTFWSLWIIVITVGTLLGCAILLVWCLKDKMGVEEGVDMGHEYDGIRELNNPLPKWWTY 60

Query: 61  LFVGTLAFSVGYLILYPGLGNWKGILPGYENGWTGANE---------------------- 98
           LF+GT  F+  YL LYPGLG++KGIL     GW  +++                      
Sbjct: 61  LFIGTFIFAAIYLTLYPGLGSFKGIL-----GWQSSDQTVRSLEESRASIAAAQQNKQLV 115

Query: 99  -WQKEMDKADARFGPIFAKYAAMP-------VEEVAKDPQALKMGSRLFASNCSVCHGSD 150
            + KE+D A+A +G  F + A          + ++A D  ALK+G RLF  NCS CHGSD
Sbjct: 116 QYSKELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDALKVGQRLFLQNCSQCHGSD 175

Query: 151 AKGAFGFPNLTDNDWRWGGDPETIKTSIMSGRHGVMPAWAEVIGDQGVADVAAFVVSKLD 210
           A+G  GFPNLTD+ W +GG+P+ I T+I  GR G MPAW +++G+QGV +V ++ +S L 
Sbjct: 176 ARGQKGFPNLTDDAWLYGGEPQAIVTTIRHGRIGQMPAWKDILGEQGVKEVVSYTLS-LS 234

Query: 211 GRTLPEGAKADVENGQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQT 270
           GR++   AK + E G+  FA  C ACHG +GKG PA GAPNLT    +++G S A++ +T
Sbjct: 235 GRSV--NAK-EAEAGKARFAV-CSACHGTDGKGNPAFGAPNLT-DNDWLFGDSRAEVTET 289

Query: 271 IRYGRQGQMPAQAEIQGNDKVHLLAAYVYSLS 302
           +  GR G MPA     G +K+ L+AAYV+SLS
Sbjct: 290 VMNGRSGVMPAWINTLGEEKIQLVAAYVWSLS 321