Pairwise Alignments

Query, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 205 a.a., cytochrome c4 from Vibrio cholerae E7946 ATCC 55056

 Score = 56.2 bits (134), Expect = 6e-13
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 20/176 (11%)

Query: 143 CSVCHGSDAKGAFG-FPNLTDNDWRW-GGDPETIKTSIMSG-RHG----VMPAWAEVIGD 195
           C+ CHG+D       +P L     ++     + +K    SG + G    VM A A  + D
Sbjct: 32  CAACHGADGNSPLTIYPKLAGQHEKYLEKQLKELKLGASSGGKQGRYDPVMSAMAMPLSD 91

Query: 196 QGVADVAAFVVSK-LDGRTLPEGAKADVENGQKIFAAN--------CVACHGPEGKGTPA 246
           + +AD+AA+  S  + G T PE     V  G+ ++ A         C+ACHGP G GT  
Sbjct: 92  EDIADLAAYYASMPISGNTTPEDV---VAQGKVLYTAGDASRGLTACIACHGPRGNGTEL 148

Query: 247 MGAPNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQAEIQGND-KVHLLAAYVYSL 301
            G P ++   A    +   + +   R     +M      +  D  + +L+ YV  L
Sbjct: 149 SGFPKISGQHADYIKAQLEKFRSGTRANDMNEMMRDVAHKLTDADIDILSKYVGGL 204



 Score = 26.6 bits (57), Expect = 5e-04
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 7/94 (7%)

Query: 218 AKADVENGQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQ-QTIRYGRQ 276
           A+  +E G K  +  C ACHG +G  +P    P L             +L+      G+Q
Sbjct: 18  AQGSIEAG-KAKSLTCAACHGADG-NSPLTIYPKLAGQHEKYLEKQLKELKLGASSGGKQ 75

Query: 277 GQ----MPAQAEIQGNDKVHLLAAYVYSLSQDGS 306
           G+    M A A    ++ +  LAAY  S+   G+
Sbjct: 76  GRYDPVMSAMAMPLSDEDIADLAAYYASMPISGN 109