Pairwise Alignments

Query, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 287 a.a., FixP2 Diheme c-type cytochrome from Sinorhizobium meliloti 1021

 Score =  163 bits (413), Expect = 4e-45
 Identities = 97/281 (34%), Positives = 146/281 (51%), Gaps = 27/281 (9%)

Query: 38  ETMGHSFDGIEEYDNPLPKWWFWLFVGTLAFSVGYLILYPG----LGNWKGILPGYENGW 93
           ET GH +DGI E +NPLP+WW + F  T+ +++GY + YP       + KG+L     G+
Sbjct: 13  ETTGHEWDGIRELNNPLPRWWVYSFYATIIWAIGYAVAYPSWPMLTESTKGVL-----GY 67

Query: 94  TGANEWQKEMDKADARFGPIFAKYAAMPVEEVAKDPQ----ALKMGSRLFASNCSVCHGS 149
           +   E   E+ +A A       + A+  VE++  +P+    A+ +G+  F  NC+ CHGS
Sbjct: 68  SSRAEVSAELAEAKAAQAGNLERIASSAVEDIMANPELKQFAITIGASAFKVNCAQCHGS 127

Query: 150 DAKGAFGFPNLTDNDWRWGGDPETIKTSIMSG---------RHGVMPAWAEVIGDQGVAD 200
              G  GF NL D++W WGG PE I  +I  G         R   MPA+ + +  + V  
Sbjct: 128 GTAGGKGFTNLNDDEWLWGGKPEEIYQTIAHGIRYSGDGETRVSEMPAFTDTLAPREVRA 187

Query: 201 VAAFVVSKLDGRTLPEGAKADVENGQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIY 260
            AA+V S     + P    A VE G+++FA NC +CHG + KGT   GAPNL     ++ 
Sbjct: 188 TAAYVASLTGTPSNP----ALVEPGKQLFAENCASCHGADAKGTREFGAPNLA-DAIWLN 242

Query: 261 GSSFAQLQQTIRYGRQGQMPAQAEIQGNDKVHLLAAYVYSL 301
           G     +   ++  + G MPA  +  G+  V  LA +V+SL
Sbjct: 243 GEGEQAIIDQMKSPKHGVMPAWLQRIGDPVVKELAVFVHSL 283



 Score = 38.9 bits (89), Expect = 1e-07
 Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 12/105 (11%)

Query: 215 PEGAKADVENGQKIFAANCVACHGPEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRYG 274
           PE  +  +  G   F  NC  CHG    G    G  NL   + +++G    ++ QTI +G
Sbjct: 103 PELKQFAITIGASAFKVNCAQCHGSGTAG--GKGFTNLNDDE-WLWGGKPEEIYQTIAHG 159

Query: 275 ---------RQGQMPAQAEIQGNDKVHLLAAYVYSLSQDGSAEAV 310
                    R  +MPA  +     +V   AAYV SL+   S  A+
Sbjct: 160 IRYSGDGETRVSEMPAFTDTLAPREVRATAAYVASLTGTPSNPAL 204