Pairwise Alignments

Query, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

Subject, 291 a.a., Cytochrome c oxidase cbb3-type, subunit III (NCBI) from Rhodospirillum rubrum S1H

 Score =  153 bits (387), Expect = 4e-42
 Identities = 94/283 (33%), Positives = 144/283 (50%), Gaps = 30/283 (10%)

Query: 39  TMGHSFDGIEEYDNPLPKWWFWLFVGTLAFSVGYLILYPGLGNWKGILPGYENGWTGANE 98
           T GH +DGI E + PLP WW W+F  T+ +++ Y+++YP +       PG   GW    E
Sbjct: 15  TTGHEWDGITELNTPLPAWWVWVFYATIVWALAYVVVYPAIPLGASATPGL-FGWHSRTE 73

Query: 99  WQKEMDKADARF-GPIFAKYAAMPVEE-VAKDP---QALKMGSRLFASNCSVCHGSDAKG 153
            QK+M++A   F     A+  +M V+  +A DP    A + G  +F  NC+ CH S   G
Sbjct: 74  LQKDMNQAYQAFHADKVARIESMDVDAIIADDPLRQYATRAGEVIFKENCAPCHQSGGAG 133

Query: 154 AFGFPNLTDNDWRWGGDPETIKTSIMSG----------RHGVMPAWAEVIGDQGVADVAA 203
            +G+P L D++W WGG  + I T++  G          R   MP++AE + ++ +  +A 
Sbjct: 134 NYGYPTLADDEWLWGGTADAIYTTVRHGIRDTNTFDDTRFNEMPSFAE-LPEEDLNALAD 192

Query: 204 FVVSKLDGRTLPEGAKADVENGQKIFAANCVACH-----GPEGKGTPAMGAPNLTHPQAF 258
           +VV+   G +LP G      +GQ++F  NC  CH     GP   G  AMGAP L + Q +
Sbjct: 193 YVVAASAG-SLPAG------HGQQLFEENCAVCHASESSGPVPDGNQAMGAPALNN-QIW 244

Query: 259 IYGSSFAQLQQTIRYGRQGQMPAQAEIQGNDKVHLLAAYVYSL 301
           +Y      +   +R  +QG MP  A    +  +     YV+SL
Sbjct: 245 LYKGDKESILAQLRAPKQGMMPGWANRLKDSDIKSATVYVHSL 287