Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

 Score =  790 bits (2041), Expect = 0.0
 Identities = 362/454 (79%), Positives = 409/454 (90%)

Query: 9   YNYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPSLNFDLPWTSFGRLRPLHTNAVIFAF 68
           YNY VVRQF ++T++WGIVGM +GV IAAQL WP LNFD PW ++ RLRPLHTNAVIFAF
Sbjct: 13  YNYTVVRQFTLVTILWGIVGMAVGVLIAAQLVWPQLNFDTPWLTYSRLRPLHTNAVIFAF 72

Query: 69  GGCALFATSYYSVQRTCQTTLFAPGLAAFTFWGWQLVILLAAISLPLGYTSSKEYAELEW 128
           G  ALFATSYY VQRTCQT LF   L  FTFWGWQ +I+ AAI+LPLGYTS KEYAELEW
Sbjct: 73  GTSALFATSYYVVQRTCQTRLFGGPLVPFTFWGWQAIIVSAAITLPLGYTSGKEYAELEW 132

Query: 129 PIDILITIVWVGYAIVFFGTLMKRNTKHIYVGNWFFGAFILTVALLHIVNNLELPVSLTK 188
           PIDI I  VWV YA+VFFGTL+KR T HIYV NWFFGAFI+TVA+LHIVN++ LPVS+ K
Sbjct: 133 PIDIAIAAVWVAYAVVFFGTLVKRKTSHIYVANWFFGAFIITVAVLHIVNSMALPVSMGK 192

Query: 189 SYSVYAGATDAMVQWWYGHNAVGFFLTAGFLGMMYYYVPKQAERPVYSYRLSIVHFWALI 248
           SYS+YAGA DAMVQWWYGHNAVGF LTAGFLGMMYY+VPKQAERPVYSYRLSIVHFWALI
Sbjct: 193 SYSIYAGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALI 252

Query: 249 TLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPILR 308
           +LYIWAGPHHLHYTALPDW QSLGMVMSL+L APSWGGMING+MTLSGAWHKLR DPILR
Sbjct: 253 SLYIWAGPHHLHYTALPDWTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWHKLRYDPILR 312

Query: 309 FLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYHTIPK 368
           FL+VSL+FYGMSTFEGPMM+IKTVNALSHYTDWTIGHVH+GALGWVAM+SIG++YH IP+
Sbjct: 313 FLIVSLSFYGMSTFEGPMMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPR 372

Query: 369 VFGKERMYSLGLINAHFWLATIGTVLYIASMWVNGIAQGLMWRAVNSDGTLTYSFVETLV 428
           +FG+ERMYS+ LINAHFWLATIGTVLYI +MW++G+ QGLMWRAVNSDGTLTYSFVE++ 
Sbjct: 373 LFGQERMYSVSLINAHFWLATIGTVLYIVAMWISGVMQGLMWRAVNSDGTLTYSFVESVQ 432

Query: 429 ASHPGFVVRFVGGAIFLSGMFLMAWNTWRTVRSP 462
           AS+P + VRF+GG IFLSGMFLMA+N ++T+ +P
Sbjct: 433 ASYPFYTVRFIGGFIFLSGMFLMAYNAYKTISAP 466