Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 483 a.a., Cbb3-type cytochrome oxidase subunit 1-like from Synechococcus elongatus PCC 7942

 Score =  221 bits (563), Expect = 4e-62
 Identities = 131/448 (29%), Positives = 207/448 (46%), Gaps = 19/448 (4%)

Query: 22  VVWGIVGMGLGVFIAAQLAWPSLNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYSV 81
           +VW I+GM LG+  A +L +P          FGR+RP H N ++F +        + Y V
Sbjct: 42  LVWMILGMCLGMIAAIKLTYPDFLGGAAPLGFGRVRPEHVNTILFGWIVGGEIGAALYIV 101

Query: 82  QRTCQTTLFAPGLAAFTFWGWQLVILLAAISLPLGYTSSKEYAELEWPIDILITIVWVGY 141
            R CQ +L    L A + W + + +LL  +S+ LG+T   EY E    I++ + I     
Sbjct: 102 PRVCQRSLILGELGALSGWAYHIAVLLGLVSVSLGWTKGAEYEEWVRGINLAVVITVNLT 161

Query: 142 AIVFFGTLMKRNTKHIYVGNWFFGAFILTVALLHIVNNLELPVSLTKSYSVYAGATDAMV 201
           A+    T  +R    ++V  W+F  F +    ++I  NL          S  AGA  A++
Sbjct: 162 ALCLVLTAFERRVSGLFVSVWYFFLFAIAFDFIYIPANL----------SRNAGAEGAVI 211

Query: 202 QWWYGHNAVGFFLTAGFLGMMYYYVPKQAERPVYSYRLSIVHFWALITLYIWAGPHHLHY 261
            W+YGHNAVG  +T   L + YY VP+   R ++++ ++ + FW     YIW G HHL Y
Sbjct: 212 NWYYGHNAVGSVMTGAGLAIAYYVVPRLLNRQLFAHGIATLSFWTFAGFYIWNGGHHLLY 271

Query: 262 TALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPILRFLVVSLAFYGMST 321
             +P +   +G   +  +  P     ++   T+ G W  +     +RF V++   Y  ++
Sbjct: 272 GPVPRFITMMGYFAAFGMTLPFVLSTVSLWGTIWGQWRAILDSIAVRFAVLAGFVYFWAS 331

Query: 322 FEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYHTIPKVFGKERMYSLGLI 381
             G M+A   +  + H++D TI HVH   LG+        LY  + +  G  R     L 
Sbjct: 332 ASGAMLAWHELTVIQHFSDNTIAHVHLAFLGFTTPALNALLYLMVER--GMRRPLIPVLQ 389

Query: 382 NAHFWLATIGTVLYIASMWVNGIAQGLMWRAVNSDGTLTYSFVETLVASHPGFVVRFVGG 441
             H+W+  IG  LYI  ++     +G+ W            F ET+   +P + +R   G
Sbjct: 390 KLHWWMFVIGCALYILPIYGAAFFEGVGW-------FQQVPFSETVALRYPYYYLRMYSG 442

Query: 442 AIFLSGMFLMAWNTWRTVRSPALDVAPA 469
              + G   M WN     RSPAL+  PA
Sbjct: 443 LFLIGGQLAMVWNLIYAWRSPALEAVPA 470