Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 539 a.a., cbb3-type cytochrome c oxidase subunit I from Sinorhizobium meliloti 1021

 Score =  629 bits (1623), Expect = 0.0
 Identities = 295/473 (62%), Positives = 368/473 (77%), Gaps = 9/473 (1%)

Query: 7   TAYNYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPSLNFDLPWTSFGRLRPLHTNAVIF 66
           T Y  +VV+   I TV WG+VG  +GV +A QLA+P LN + PW +FGR+RPLHT+AVIF
Sbjct: 65  TEYFDEVVKYGVIATVFWGVVGFLVGVVVALQLAFPDLNVE-PWFNFGRVRPLHTSAVIF 123

Query: 67  AFGGCALFATSYYSVQRTCQTTLFAPGLAAFTFWGWQLVILLAAISLPLGYTSSKEYAEL 126
           AFGG AL ATS+Y VQRT +  LF   L  F FWG+QL I+LAA    LG T S+EYAE 
Sbjct: 124 AFGGNALIATSFYVVQRTSRARLFGGDLGWFVFWGYQLFIVLAATGYLLGITQSREYAEP 183

Query: 127 EWPIDILITIVWVGYAIVFFGTLMKRNTKHIYVGNWFFGAFILTVALLHIVNNLELPVSL 186
           EW +D+ +TIVWV Y  VF GT++ R   HIYV NWF+ AFI+T+A+LHIVNNL +PVS 
Sbjct: 184 EWYVDLWLTIVWVAYLAVFLGTVLMRKEPHIYVANWFYLAFIVTIAMLHIVNNLAVPVSF 243

Query: 187 --TKSYSVYAGATDAMVQWWYGHNAVGFFLTAGFLGMMYYYVPKQAERPVYSYRLSIVHF 244
             +KSYS +AG  DA+ QWWYGHNAVGFFLTAGFL MMYY++PKQ  RPVYSYRLSI+HF
Sbjct: 244 MGSKSYSAFAGVQDALTQWWYGHNAVGFFLTAGFLAMMYYFIPKQVNRPVYSYRLSIIHF 303

Query: 245 WALITLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSD 304
           WALI +YIWAGPHHLHYTALPDWAQ+LGMV S++L  PSWGGMING+MTLSGAW K+R+D
Sbjct: 304 WALIFMYIWAGPHHLHYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSGAWDKIRTD 363

Query: 305 PILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYH 364
           P++R +V+++AFYGM+TFEGPMM+IKTVN+LSHYTDWTIGHVH+GALGW  +I+ GA+Y+
Sbjct: 364 PVVRMMVMAVAFYGMATFEGPMMSIKTVNSLSHYTDWTIGHVHSGALGWNGLITFGAVYY 423

Query: 365 TIPKVFGKERMYSLGLINAHFWLATIGTVLYIASMWVNGIAQGLMWRAVNSDGTLTYSFV 424
            +PK++ +ER+YSL ++N HFWLAT+G V+Y A+MWV GI QGLMWR  +  G L YSF 
Sbjct: 424 LVPKLWNRERLYSLQMVNWHFWLATLGIVVYAATMWVAGIQQGLMWREYDDQGFLVYSFA 483

Query: 425 ETLVASHPGFVVRFVGGAIFLSGMFLMAWNTWRTV------RSPALDVAPANA 471
           E++ A  P +V+R  GGA+FL+G  +MA+N   T+       + ALD AP  A
Sbjct: 484 ESVAAMFPYYVMRAAGGALFLAGALVMAFNVTMTILGRVRDEAAALDAAPLPA 536