Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 536 a.a., cytochrome c oxidase subunit 1 from Phaeobacter inhibens DSM 17395

 Score =  627 bits (1616), Expect = 0.0
 Identities = 297/466 (63%), Positives = 366/466 (78%), Gaps = 9/466 (1%)

Query: 9   YNYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPSLNFDLPWT----SFGRLRPLHTNAV 64
           Y   VVR   + T  WG+VG  +GVFIA QLA+P LNF+  W     +FGRLRPLHT+AV
Sbjct: 65  YFDSVVRAGVVATAFWGVVGFLVGVFIAFQLAFPVLNFE--WAQGLANFGRLRPLHTSAV 122

Query: 65  IFAFGGCALFATSYYSVQRTCQTTLFAPGLAAFTFWGWQLVILLAAISLPLGYTSSKEYA 124
           IFAFGG AL ATS+Y VQRT    L+   LA F FWG+QL I+LAA     G T SKEYA
Sbjct: 123 IFAFGGNALIATSFYVVQRTSAARLWGGNLAWFVFWGYQLFIVLAATGYLFGSTQSKEYA 182

Query: 125 ELEWPIDILITIVWVGYAIVFFGTLMKRNTKHIYVGNWFFGAFILTVALLHIVNNLELPV 184
           E EW +D+ +TIVWV Y  VF GT++KR   HIYV NWF+ AFI+TVA+LH+VNN+ +PV
Sbjct: 183 EPEWHVDLWLTIVWVAYLAVFLGTVIKRKEPHIYVANWFYLAFIVTVAMLHLVNNMTIPV 242

Query: 185 SL--TKSYSVYAGATDAMVQWWYGHNAVGFFLTAGFLGMMYYYVPKQAERPVYSYRLSIV 242
           S+  +KS  +++G  DAMVQWWYGHNAVGFFLTAGFLGMMYY+VPKQAERPV+SY+LSI+
Sbjct: 243 SIWGSKSVIMWSGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVFSYKLSII 302

Query: 243 HFWALITLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLR 302
           HFWALI LYIWAGPHHLHYTALPDWA +LGMV S++L  PSWGGMING+MTLSGAW KLR
Sbjct: 303 HFWALIFLYIWAGPHHLHYTALPDWASTLGMVFSIVLWMPSWGGMINGLMTLSGAWDKLR 362

Query: 303 SDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGAL 362
           +DP++R +V+S+ FYGMSTFEGPMM+I+ VN+LSHYTDWTIGHVH+GALGW  MI+ GAL
Sbjct: 363 TDPVIRMMVISIGFYGMSTFEGPMMSIRAVNSLSHYTDWTIGHVHSGALGWNGMITFGAL 422

Query: 363 YHTIPKVFGKERMYSLGLINAHFWLATIGTVLYIASMWVNGIAQGLMWRAVNSDGTLTYS 422
           Y  +P ++ +ER+YSL L++ HFWLATIG +LY ASMWV GI +GLMWR V+++G L  S
Sbjct: 423 YFLVPVLWKRERLYSLSLVSWHFWLATIGIILYAASMWVTGIMEGLMWREVDANGFLVNS 482

Query: 423 FVETLVASHPGFVVRFVGGAIFLSGMFLMAWNTWRTV-RSPALDVA 467
           F +T+ A  P +VVR +GG +FL+G  +M +N W TV R+PA + +
Sbjct: 483 FADTVAAKFPMYVVRALGGVMFLAGALIMCYNLWMTVRRAPAKEAS 528