Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

Subject, 536 a.a., cytochrome-c oxidase (RefSeq) from Shewanella loihica PV-4

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 20/260 (7%)

Query: 157 IYVGNWFFGAFILTVALLHIVNNLELPVSL----TKSYSVYAGATDAMVQ---WWYGHNA 209
           ++V  W   AF+L   +  +   + + ++     T  +    G    M Q   W++GH  
Sbjct: 207 LFVWTWLITAFLLIAVMPVLAGTVTMVLTDKFFGTSFFDAAGGGDPVMFQHIFWFFGHPE 266

Query: 210 VGFFLTAGFLGMMYYYVPKQAERPVYSYRLSIVHFWA---LITLYIWAGPHHLHYTALPD 266
           V   +   F G++   VP  + + ++ Y  S+V+  A   +++  +WA  HH+  T +P 
Sbjct: 267 VYIMILPSF-GIISAIVPAFSRKKLFGYS-SMVYATASIAILSFLVWA--HHMFTTGMPV 322

Query: 267 WAQSLGMVMSLILLAPSWGGMINGMMTLSGAWH-KLRSDPILRFLVVSLAFYGMSTFEGP 325
           +A+   M  ++++  P+   + N + TL   W   L  +  + F +  +  + +  F G 
Sbjct: 323 FAELFFMYCTMLIAVPTGVKVFNWVATL---WRGSLTFETPMLFALAFIILFTIGGFSGL 379

Query: 326 MMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYHTIPKVFGKERMYSLGLINAHF 385
           M+AI  V+   H T + + H H   +       + A Y+ +PK  G   MYS  L   HF
Sbjct: 380 MLAITPVDFQYHDTYFVVAHFHYVLVSGAIFSIMAAAYYWLPKWTG--HMYSEKLGKLHF 437

Query: 386 WLATIGTVLYIASMWVNGIA 405
           W + I   +    M   G+A
Sbjct: 438 WCSVISVNVLFFPMHFLGLA 457